Query= MSMg01no268_f22.b1 MSMg01no268_f22.b1 CHROMAT_FILE:
MSMg01no268_f22.b1 PHD_FILE: MSMg01no268_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:38 2005
(318 letters)
>mm_chr8_81413448_81414170
Length = 723
Score = 524 bits (271), Expect = e-153
Identities = 304/317 (95%), Gaps = 5/317 (1%)
Strand = Plus / Minus
Query: 5 gaattcatttcatttgtgggcagtaatattcttcttctcttgccctgtggatcctccagt 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 636 gaattcatttcatttgtgggcagtaatattcttcttatcttgccctgtggatcctccagt 577
Query: 65 atctattattattatcattattattattattgttattattattattattattattgctgc 124
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 576 atctattattattattattattattattattattattattattattattattattgctgc 517
Query: 125 tgttgttgttgtaagacaaaagaatgactgagaaaagtatccaaagggaaacataatgtc 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgttgtttttgtaagacaaaagaatgactgagaaaagtatccaaagggaaacataatgtc 457
Query: 185 agcatg-aaaaatagccaa----aggcgtactgtttttatgatggcaaagacttcctgcc 239
|||||| |||||||| ||| |||| |||||||||||||||||||| |||||||||||
Sbjct: 456 agcatgaaaaaatagtcaaaggtaggcatactgtttttatgatggcaaggacttcctgcc 397
Query: 240 tcgctgacaccacacgtgtagccagttcctcatttagcacacagctaacactttaggggt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 396 tcgctgacaccacacgtgtagccagttcctcatttagcacacagctaacactttaggagt 337
Query: 300 tgggtgcttctgctttc 316
|||||||||||||||||
Sbjct: 336 tgggtgcttctgctttc 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 723
Length adjustment: 9
Effective length of query: 309
Effective length of database: 714
Effective search space: 220626
Effective search space used: 220626
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_f22.g1 MSMg01no268_f22.g1 CHROMAT_FILE:
MSMg01no268_f22.g1 PHD_FILE: MSMg01no268_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:38 2005
(288 letters)
>mm_chr8_81247261_81247946
Length = 686
Score = 522 bits (270), Expect = e-153
Identities = 283/288 (98%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 1 aagatttgccagcagctccctccagaacttggtggtactctgagaaagcccttaaatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatttgccagcagctccctccagaacttggtggtactctgagaaagcccttaaatgga 260
Query: 61 gaacaagtcacatgggttcagagaatgacctttgaagtgattcagtggactaggtgccat 120
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacaagtcacatgggttcaga--atgacctttgaagtgattcagtggactaggtgccat 318
Query: 121 ctctcagctaagtgtgtctcgcttacgtattcccaccaatatattcacatcatcggagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 319 ctctcagctaagtgtgtctcgcttacgtattcccaccaatatattcacatcctcggagcc 378
Query: 181 tttaagctagccagacacttccccgatacctcaggttgcatgtttgtgggtcctatttgt 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 379 tttaagctagccagacacttccccgctacctcaggttgcatgtttgtgggtcctatttgt 438
Query: 241 ctctcctacaccatatcagatgaacgcacaccgctcccagagcagggt 288
||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 439 ctctcctacaccatatcagatgaacgcactccgctcccagagcagggt 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 686
Length adjustment: 9
Effective length of query: 279
Effective length of database: 677
Effective search space: 188883
Effective search space used: 188883
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
