Query= MSMg01no271_c18.b1 MSMg01no271_c18.b1 CHROMAT_FILE:
MSMg01no271_c18.b1 PHD_FILE: MSMg01no271_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:59 2005
(316 letters)
>mm_chr8_110220961_110221675
Length = 715
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 5 gaattctaacaaagcgcttgggtgatttactctcttggctcaacaagagtctttttcaaa 64
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaacaaagcgcttgggtgatttactctcttggctcaacaagagtctttttcaaa 264
Query: 65 gaggcaggcaccgctgagagggaaggctcagctctgaaggtagactggtctccatctaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaggcaggcaccgctgagagggaaggctcagctctgaaggtagactggtctccatctaga 324
Query: 125 atcctggctgctcacgtggctccaacatctgcaagcttgaggtctttgaatctgtaaatt 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 atcctggctgctcacgtggctccaatatctgcaagcttgaggtctttgaatctgtaaatt 384
Query: 185 gacattgctgatgatcgaaaagcacagcaaaaaatcagcacctggcgtgcaggtgagctc 244
|| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 385 gaaattgctgatgatcgaaaagcacagcaaaaa-tcagcacctggcatgcaggtgagctc 443
Query: 245 tcagtcgtagccgctgccatcgtcctaattaaatgtaaccatcaccctgattaaacttga 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcagtcgtagccgccgccatcgtcctaattaaatgtaaccatcaccctgattaaacttga 503
Query: 305 cctagaacttac 316
||||||||||||
Sbjct: 504 cctagaacttac 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_c18.g1 MSMg01no271_c18.g1 CHROMAT_FILE:
MSMg01no271_c18.g1 PHD_FILE: MSMg01no271_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:59 2005
(356 letters)
>mm_chr8_110386750_110387505
Length = 756
Score = 636 bits (329), Expect = 0.0
Identities = 350/357 (98%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 1 atgctgagactccatggtccgctccgtatctccatcttttcatgggcagaacatgaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgctgagactccatggtccgctccgtatctccatcttttcatgggcagaacatgaagag 321
Query: 61 atgatgatgagccacagacctgtgacatctgaggacaagagcaaaggaatgcaggagatg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 320 atgatgatgagccacagacctgtgacatctaaggacaagagcaaaggaatgcaggagatg 261
Query: 121 tggtttatatataaaagggcagagagagcccacgtgaagaattatgagaagaattatggg 180
||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 260 tggtttacatataaaagggcagagagagcgcacgtgaagaattacgagaagaattatggg 201
Query: 181 cagggccagtgcagtggtttagtcagtaaggtgttgactttccagcctgagtt-cccccc 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 200 cagggccagtgcagtggtttagtcagtaagttgttgactttccagcctgagttccccccc 141
Query: 240 acttaagtttgattccccaaatctatggaaatgtgagagaggactgactccccaaaggtg 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 140 acttaagtttgattccccaaacctatggaaatgtgagagaggactgactccccaaaggtg 81
Query: 300 tcctctgacctacatggtacgccaccccaacccacccccaacatgcacacaatgtta 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tcctctgacctacatggtacgccaccccaacccacccccaacatgcacacaatgtta 24
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
