Query= MSMg01no271_d22.b1 MSMg01no271_d22.b1 CHROMAT_FILE:
MSMg01no271_d22.b1 PHD_FILE: MSMg01no271_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:04 2005
(322 letters)
>mm_chr8_102353507_102354228
Length = 722
Score = 569 bits (294), Expect = e-166
Identities = 312/318 (98%)
Strand = Plus / Plus
Query: 5 gaattccagagaagtttccgcttttttaattaaaacttacaaagctttttattgttgctt 64
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagagaagtaacagcttttttaattaaaacttacaaagctttttattgttgctt 264
Query: 65 ttataaaaacatattttcttgtctactgtacttatatagattcttgcagttcaacacgtt 124
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttataaaaacaaattttattgtctactgtacttatatagattcttgcagttcaacacgtt 324
Query: 125 gatatgatgcccctttgaaaactcatcaccaccccagagagggaagagaaagggttgact 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatatgatgctcctttgaaaactcatcaccaccccagagagggaagagaaagggttgact 384
Query: 185 gagctgaaattatcctagattgtctttgagaaactgtgcagagggcatcaataaatagca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagctgaaattatcctagattgtctttgagaaactgtgcagagggcatcaataaatagca 444
Query: 245 ggggaaggcagccctattacttctggccattctgtacaaagtcaacctttaaccagcaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggggaaggcagccctattacttctggccattctgtacaaagtcaacctttaaccagcaga 504
Query: 305 gcaggcttttagtttgat 322
||||||||||||||||||
Sbjct: 505 gcaggcttttagtttgat 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_d22.g1 MSMg01no271_d22.g1 CHROMAT_FILE:
MSMg01no271_d22.g1 PHD_FILE: MSMg01no271_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:05 2005
(373 letters)
>mm_chr8_102447384_102448157
Length = 774
Score = 661 bits (342), Expect = 0.0
Identities = 366/374 (97%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 1 aatttattgcaggatta-tttttttctaatttctgactttgataaacaagatagaaagag 59
||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||
Sbjct: 574 aatttattgcaggattattttttttctaatttcagactttgataaacaagctagaaaaag 515
Query: 60 gagagagatattatcaatattagaaaaacttatgccatattcaacattaataatgtaaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gagagagatattatcaatattagaaaaacttatgccatattcaacattaataatgtaaaa 455
Query: 120 tgtgaaaacatttaaatgaaagtgacatcatataacatatgatttcttttgataaataat 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 454 tgtgaaaacatttaaatgaaagtgacatcatataacatatgatttctttggataaataat 395
Query: 180 gtcaaattgagcacatcttatgcttacattaaaattccaaagtttttaaggtctatagtt 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 394 gtcaaattgagcacatcttatgcttacattaaaattccaatgtttttaaggtctatagtt 335
Query: 240 ctcatttagatatttctaaagtgttggttttagggcagtaaatgtttaatcagaaattct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctcatttagatatttctaaagtgttggttttagggcagtaaatgtttaatcagaaattct 275
Query: 300 tttgtggggggaacaatctgtttccatatagatgtggtgtctggataacattcttaaggt 359
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 274 tttgtggggggaacaatctgtttccatatagatatggtgtctggaaaacattcttaaggt 215
Query: 360 aacatattttccag 373
||||||||||||||
Sbjct: 214 aacatattttccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 774
Length adjustment: 9
Effective length of query: 364
Effective length of database: 765
Effective search space: 278460
Effective search space used: 278460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
