Query= MSMg01no272_e14.b1 MSMg01no272_e14.b1 CHROMAT_FILE:
MSMg01no272_e14.b1 PHD_FILE: MSMg01no272_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:24 2005
(324 letters)
>mm_chr8_7380648_7381373
Length = 726
Score = 563 bits (291), Expect = e-165
Identities = 314/325 (96%), Gaps = 8/325 (2%)
Strand = Plus / Plus
Query: 5 gaattcataggta----ttttataaccattatgacaacatgaatcttgttcaagtaaaga 60
||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcataggtaacaat---ataaccattatgacaacatgaatcttgttcaagtaaaga 261
Query: 61 gtacagatacatctgaaatttaattcctggacacagacagataagtggttataagagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtacagatacatctgaaatttaattcctggacacagacagataagtggttataagagaaa 321
Query: 121 atctgtaacaaaggctaacaagcaaaggaaacagcaaggatattgaaaaaaaaaa-gaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 atctgtaacaaaggctaacaagcaaaggaaacagcaaggatattgaaaaaaaaaaagaga 381
Query: 180 aaatcaagagatgtatggataaaatagacatcatccaaggtacactgtcaccttgcataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaatcaagagatgtatggataaaatagacatcatccaaggtacactgtcaccttgcataa 441
Query: 240 agggaaagatgaggtatcttaagttacacaactttccataaccattgtcctatttttggt 299
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 agggaaagatgaggtatcttaagttacacaactttccataactattgtcctatttttggt 501
Query: 300 taaagtgttctgccataacttcttg 324
|||| || |||||||||||||||||
Sbjct: 502 taaaatgctctgccataacttcttg 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 726
Length adjustment: 9
Effective length of query: 315
Effective length of database: 717
Effective search space: 225855
Effective search space used: 225855
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_e14.g1 MSMg01no272_e14.g1 CHROMAT_FILE:
MSMg01no272_e14.g1 PHD_FILE: MSMg01no272_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:24 2005
(292 letters)
>mm_chr8_7533523_7534214
Length = 692
Score = 476 bits (246), Expect = e-139
Identities = 255/258 (98%)
Strand = Plus / Minus
Query: 1 catttggcactgcttgttttcttttcatactcagagctctcgtctaaggagctggggcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 catttggcactgcttgttttcttttcatactcagagctctcgtctaaggagctggggcaa 387
Query: 61 gggaagagtgtgtgctaccaaacaggtccaagtcttctatgggattacttttgagtaagt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gggaagagtgtgggctaccaaacaggtccaagtcttctatgggattacttttgagtaagt 327
Query: 121 aaagcataatatcaacctagagtttttactctaataagaatggtggagaaatcaaaaaca 180
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 326 aaagcataatatcaacctagagtttttacactaataaggatggtggagaaatcaaaaaca 267
Query: 181 ttagtttgttgccacttcaaaactctttactacagaaaatatctatcccttaatctatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttagtttgttgccacttcaaaactctttactacagaaaatatctatcccttaatctatct 207
Query: 241 attaggaatttataaata 258
||||||||||||||||||
Sbjct: 206 attaggaatttataaata 189
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
