Query= MSMg01no273_i13.b1 MSMg01no273_i13.b1 CHROMAT_FILE:
MSMg01no273_i13.b1 PHD_FILE: MSMg01no273_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:55 2005
(321 letters)
>mm_chr8_66718406_66719126
Length = 721
Score = 513 bits (265), Expect = e-150
Identities = 301/317 (94%), Gaps = 9/317 (2%)
Strand = Plus / Plus
Query: 5 gaattcttctttactatccagaataatttgaattcttgatataataaaatttctgctggt 64
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcttctttactttccagaataatttgaattcttgatataataacatttctgctggt 264
Query: 65 catgtttccaaactcagtctgttaacagaaagatcattgaccctcaactaaagcatttgc 124
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 265 catgtttccaaactcagtctgttaacagaaagatcattga-cctcaactaaagcattttc 323
Query: 125 tttaaaataataaaacttatccatccattgtttatcagatttt-aaaaatatggaagaca 183
||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 324 tttaaaataataaaactcatccatccactgtttatcagattttaaaaaatatggaagaca 383
Query: 184 gaggtgtgtaactattctccccccccccactctccctccttctttaaacagggtttttct 243
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 384 gaggtgtgtaactattcttccccc-------ctccctccttctttaaacagggtttttct 436
Query: 244 atgtagctctggctagcctgggactcactaggtagaccaggctgactttgaactcacaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 437 atgtagctctggctagcctgggactcactaggtagaccaggctgactttgatctcacaag 496
Query: 304 gatctgcctgcctctgc 320
|||||||||||||||||
Sbjct: 497 gatctgcctgcctctgc 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_i13.g1 MSMg01no273_i13.g1 CHROMAT_FILE:
MSMg01no273_i13.g1 PHD_FILE: MSMg01no273_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:55 2005
(285 letters)
>mm_chr8_66900451_66901135
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Minus
Query: 1 tctccggggagtattccaatccattgtctccaggaaggaaaacaaatccatcttgataaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 342 tctccggggagtattccaatccattgtctccaggaaggaaaacaaatcaatcttgataaa 283
Query: 61 ataaaagagagtttagaaatcaaaagggcccttggaggttttaagtggctttgtttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ataaaagagagtttagaaatcaaaagggcccttggaggttttaagtggctttgtttttat 223
Query: 121 ttatatatttttagatagcagtttcccttcctcccttctctctccctttctcttctctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ttatatatttttagatagcagtttcccttcctcccttctctctccctttctcttctctct 163
Query: 181 cctctttccttttgacaagactccatgtatctggacagccctgtggtcactgtgcatttg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cctctttcctttcgacaagactccatgtatctggacagccctgtggtcactgtgcatttg 103
Query: 241 agaagaacttgtgtttatgatatgattgcctctacttcccaggtg 285
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 102 agaagaacttgtgtttatgacatgattgcctctacttcccaggtg 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
