Query= MSMg01no273_o23.b1 MSMg01no273_o23.b1 CHROMAT_FILE:
MSMg01no273_o23.b1 PHD_FILE: MSMg01no273_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:24 2005
(310 letters)
>mm_chr8_29970771_29971481
Length = 711
Score = 547 bits (283), Expect = e-160
Identities = 304/311 (97%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 1 ggaggctttccttgtttggacaatttgagcatagaaacaaattatagataaaaagtataa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 511 ggaggctttccttgtttggacaatttgagcatagaaacaaattatagttaaaaagtataa 452
Query: 61 ctcattaagtaaggattcacattgattaagtatgtatagctaaagcaagtatctggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctcattaagtaaggattcacattgattaagtatgtatagctaaagcaagtatctggagag 392
Query: 121 gatgctcatgggtaaagcatctgctacgtaagtgtgtgaaccagatctccagatatcagt 180
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 391 gatgcgcatgggtaaagcatctgctacataagtgtgtgaaccagatctccagatatcagt 332
Query: 181 tgttcacataaatagcacccatac-aaaaattctggttctcgagtatacacctaagtcct 239
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 331 tgttcacataaatagcacccatacaaaaaaatctggttctcgagtatacacgtaagtcct 272
Query: 240 tggttctgcacatatagttgtcatgtacatgagatatggtaacactaacaaatcattcta 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgattctgcacatatagttgtcatgtacatgagatatggtaacactaacaaatcattcta 212
Query: 300 gatttgctgtt 310
|||||||||||
Sbjct: 211 gatttgctgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 711
Length adjustment: 9
Effective length of query: 301
Effective length of database: 702
Effective search space: 211302
Effective search space used: 211302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_o23.g1 MSMg01no273_o23.g1 CHROMAT_FILE:
MSMg01no273_o23.g1 PHD_FILE: MSMg01no273_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:24 2005
(293 letters)
>mm_chr8_29823045_29823737
Length = 693
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%)
Strand = Plus / Plus
Query: 1 tcagccagttccctgctacactggagatggcgctcaaggaggaatagtggaaatgcatgc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagccagtcccctgctacactggagatggcgctcaaggaggaatagtggaaatgcatgc 260
Query: 61 taaggtggaaagcatggtagacaggaatctaaatataggataaagccatttgtaagatcc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaggtggaaaacatggtagacaggaatctaaatataggataaagccatttgtaagatcc 320
Query: 121 tgctgtattcttgctagggaagtagaatcaacaaatccaattctcacacccccaaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgtattcttgctagggaagtagaatcaacaaatccaattctcacacccccaaaacaa 380
Query: 181 aagagatgggaggaaatgaaccagggcagcccattttcactgcgtgctggatttagaggc 240
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 aagagatgagaggaaatgaaccagggcagcccattttcgctgcgtgctggatttagaggc 440
Query: 241 aagtttatgctgacagatggacggcgtaaaatgaaaatgggttttcaagtg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtttatgctgacagatggacggcgtaaaatgaaaatgggttttcaagtg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
