Query= MSMg01no275_f18.b1 MSMg01no275_f18.b1 CHROMAT_FILE:
MSMg01no275_f18.b1 PHD_FILE: MSMg01no275_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:05 2005
(371 letters)
>mm_chr8_54919415_54920185
Length = 771
Score = 710 bits (367), Expect = 0.0
Identities = 370/371 (99%)
Strand = Plus / Minus
Query: 1 ttccatttttcttcagtgtcattgtctgatctacaaacacaggtctgtatccacctcttc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttccatttttctttagtgtcattgtctgatctacaaacacaggtctgtatccacctcttc 415
Query: 61 tgtaatatgttaaaagcacgaatgactgtcttggtccactgatggtcacttgatgaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tgtaatatgttaaaagcacgaatgactgtcttggtccactgatggtcacttgatgaagta 355
Query: 121 aagatacctattaaagcctctgagtactgattcaatgttagatatgctgccacttttagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aagatacctattaaagcctctgagtactgattcaatgttagatatgctgccacttttagg 295
Query: 181 aactgttttctcaacataaattctaagaattttgacagggatttctttaaaaattaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aactgttttctcaacataaattctaagaattttgacagggatttctttaaaaattaatgt 235
Query: 241 gagctctttcttttttaaaaatataagtatagctccatggaccggactcagtgggtctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gagctctttcttttttaaaaatataagtatagctccatggaccggactcagtgggtctct 175
Query: 301 caatccgaggggaaccagggtttcggtaatcagtctttttccctcacccaacagcagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 caatccgaggggaaccagggtttcggtaatcagtctttttccctcacccaacagcagatc 115
Query: 361 aggttcccctc 371
|||||||||||
Sbjct: 114 aggttcccctc 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_f18.g1 MSMg01no275_f18.g1 CHROMAT_FILE:
MSMg01no275_f18.g1 PHD_FILE: MSMg01no275_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:05 2005
(290 letters)
>mm_chr8_54783656_54784349
Length = 694
Score = 526 bits (272), Expect = e-154
Identities = 287/294 (97%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1 aatatggcaggaaggcagagagaagaaagatga----gaggttggatttaagctgagagc 56
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aatatggcaggaaggcagagagaagaaagatgaaagagaggttggatttaagctgagagc 260
Query: 57 tatttgcaagtccttattagttgcttaggaactttaacatatggattcactaatgaccct 116
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tatttgcaagtccttattagttgcttaggagctttaacatatggattcactaatgaccct 320
Query: 117 gccaaacttgaagtttggaaatggcataatcacatttgtagttttaaagaatcttctggt 176
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccaaacttaaagtttggaaatggcataatcacatttgtagttttaaagaatcttctggt 380
Query: 177 tataagatgtagatcagaaaaaaatatacgtaggtgttggagagtaagttaggcagctgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataagatgtagatcagaaaaaaatatacgtaggtgttggagagtaagttaggcagctgt 440
Query: 237 tgaaacaccaagatatcctaacgttaggtagatatagcatcagtgatttttaac 290
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 tgaaacaccaagatatcctaacgttaggtggatatagcatcagtgatttttaac 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 694
Length adjustment: 9
Effective length of query: 281
Effective length of database: 685
Effective search space: 192485
Effective search space used: 192485
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
