Query= MSMg01no275_i05.b1 MSMg01no275_i05.b1 CHROMAT_FILE:
MSMg01no275_i05.b1 PHD_FILE: MSMg01no275_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:16 2005
(687 letters)
>mm_chr8_53943729_53944815
Length = 1087
Score = 1193 bits (617), Expect = 0.0
Identities = 620/621 (99%)
Strand = Plus / Minus
Query: 67 tggtccagtgtttgagagatctcagtggtccagattaattgagtcagctggtcctcctac 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 tggtccagtgtttgagagatctcagtggtccagattaattgagtcagctggtcctcctac 1028
Query: 127 agggtcaccctcctcctcagcttcttccagcttttccctaattcaaccacagaggtcagc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 agggtcaccctcctcctcagcttcttccagcttttccctaattcaaccacagaggtcagc 968
Query: 187 agcttctgtccattggttgggtgcaaatatctgcatctgactctttcagctgcttgttgg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 agcttctgtccattggttgggtgcaaatatctgcatctgactctttcagctgcttgttgg 908
Query: 247 gtctttctgcagtcatgatatctatgtttgatatgatagcatttaggtttttatgaagat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 gtctttctgcagtcatgatatctatgtttgatatgatagcatttaggtttttatgaagat 848
Query: 307 atccattttttctttgtaaaataaatacctaataactattcttgatacttcaacaatcca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 atccattttttctttgtaaaataaatacctaataactattcttgatacttcaacaatcca 788
Query: 367 tgttgataaagtttccaatttgtttctgtccttgccatatagttgccatggacaaacctt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tgttgataaagtttccaatttgtttctgtccttgccatatagttgccatggacaaacctt 728
Query: 427 tgaattgttctcatgtgcagttctttttttcactacttgaaaaacagacattttcatcat 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tgaattgttctcatgtgcagttctttttttcactacttgaaaaacagacattttcatcat 668
Query: 487 caccagagaaaataataatacagtgcctactctttcaatttgttcaaattttctgtgtgg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 caccagagaaaataataatacagtgcctactctttcaatttgttcaaattttctgtgtgg 608
Query: 547 cctttatatttgataatcatttgaatgctttacaggcatcacaaacacatgaattatttc 606
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 607 cctttatatttgataatcatttgaatgctttacagggatcacaaacacatgaattatttc 548
Query: 607 aaattaattaattatgccaatccttataaaaataatgttaaaatagggtacatgcttaag 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaattaattaattatgccaatccttataaaaataatgttaaaatagggtacatgcttaag 488
Query: 667 accatgatataaataaaacaa 687
|||||||||||||||||||||
Sbjct: 487 accatgatataaataaaacaa 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_i05.g1 MSMg01no275_i05.g1 CHROMAT_FILE:
MSMg01no275_i05.g1 PHD_FILE: MSMg01no275_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:16 2005
(228 letters)
>mm_chr8_53919169_53919800
Length = 632
Score = 398 bits (206), Expect = e-115
Identities = 224/232 (96%), Gaps = 4/232 (1%)
Strand = Plus / Plus
Query: 1 agtactcttatcaatccataagtgtgacgggtcctttcattttctgttttctgttcagtt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 agtactcttatcaatccataagtgtgacgggtcctttcattttctcttttctgttcagtt 260
Query: 61 taatttattcagtactttatttttcttcactgtgtaatttttacactcatgtctttcatt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatttattcagtactttattgttcttcactgtgtaatttttacactcatgtctttcatt 320
Query: 121 ----ctacattttgtagggcaactgtgaataatattgcttcctggatatacatattttcc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattctacattttgtagggcaactgtgaataatattgcttcctggatatacatattttcc 380
Query: 177 cttaatatatttttgtttatagaaaggcatctgaaccctttttgccgttaat 228
|||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 381 cttaatatatttttgtgtatagaaaggcatctgaactctttttgccgttaat 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 632
Length adjustment: 9
Effective length of query: 219
Effective length of database: 623
Effective search space: 136437
Effective search space used: 136437
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
