Query= MSMg01no276_c04.b1 MSMg01no276_c04.b1 CHROMAT_FILE:
MSMg01no276_c04.b1 PHD_FILE: MSMg01no276_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:00 2005
(329 letters)
>mm_chr8_102552003_102552732
Length = 730
Score = 582 bits (301), Expect = e-171
Identities = 319/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 6 aattctaatcaactaatttactgtgaaaggaaagaattccatgtggaaggagggaagcga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aattctaatcaactaatttactgtgaaaggaaagaattccatgtggaaggagggaagcga 471
Query: 66 aaagccaagtgaaaaacacatttttctgaaaacctaaaaa-ttctgggagaacagcatgg 124
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 470 aaagccaagtgaaaaacacatttttctgaaaacctaaaaatttctgggggaacagcatgg 411
Query: 125 tgttcatacagatatacatgttaaaagataaagttgaaatgcagtttggcctcaaagttt 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgttcatacagatatacatggtaaaagataaagttgaaatgcagtttggcctcaaagttt 351
Query: 185 gaaaatcttcaagctcctggatagaatttatatgtgaagcagacaacagccacagagttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gaaaatcttcaagctcctggatagaatttatatgtgaagcagacaacagccacagagttt 291
Query: 245 taagcatgatctagtcgtgattagattggtttgaaaatatgcatctgtcatgatgtggaa 304
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 taagcatgatctagccgtgattagattggtttgaaaatatgcatctgtcatgatgtggag 231
Query: 305 agtatgcaccaaaatcaaaggatga 329
|||||||||||||| ||||||||||
Sbjct: 230 agtatgcaccaaaaccaaaggatga 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 730
Length adjustment: 9
Effective length of query: 320
Effective length of database: 721
Effective search space: 230720
Effective search space used: 230720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_c04.g1 MSMg01no276_c04.g1 CHROMAT_FILE:
MSMg01no276_c04.g1 PHD_FILE: MSMg01no276_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:00 2005
(674 letters)
>mm_chr8_102399272_102400345
Length = 1074
Score = 1255 bits (649), Expect = 0.0
Identities = 667/673 (99%)
Strand = Plus / Plus
Query: 1 ccagtgatatgtaagctcttataatagccccaacagtcaatatggaacaatcgaatattc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 201 ccagtgatatgtaagctcttataatagccccaacagtcaatatggaataattgaatattc 260
Query: 61 tacatagcatgtttcttgtaacagaaaacaatgctcagcaaagcaaagatgagtaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatagcatgtttcttgtaacagaaaacaatgctcagcaaagcaaagatgagtaagtca 320
Query: 121 tgatatgttcacattgtaatcaatggccaacagtaacaacaacaaacaagaacggaaatt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 tgatatgttcacattgtaatcaatggccaatagtaacaacaacaaacaagaacggaaatt 380
Query: 181 gatatatcatcagaatgagccaagaatataggcacctgagcttgttgtaatggatataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatatatcatcagaatgagccaagaatataggcacctgagcttgttgtaatggatataat 440
Query: 241 ttgaatctttgtattttacttatccctcccaggtgagtcagataaatagagaaaagattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaatctttgtattttacttatccctcccaggtgagtcagataaatagagaaaagattg 500
Query: 301 ggttaggatacacctacaaacaattatagatttcaaaatctaatgtaaggtgaggacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggttaggatacacctacaaacaattatagatttcaaaatctaatgtaaggtgaggacaaa 560
Query: 361 aatttgcagagtattatataactatgagttactgcacctgaactttcaaaacattcagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttgcagagtattatataactatgagttactgcacctgaactttcaaaacattcagta 620
Query: 421 caagacaaaattatgtttagtgaagtgtgtgtgtgtatgatttatatcatatatcgtata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 caagacaaaattatgtttagtgaagtgtgtgtgtgtatgatttatatcatatatcatata 680
Query: 481 cacatatatattaaagcatgtatcaatataatatgtattgacttcatctttgtgacttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacatatatattaaagcatgtatcaatataatatgtattgacttcatctttgtgacttca 740
Query: 541 atagcaaagagtatgatattcagagactattttcttccatgggggattaaattttcttac 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataacaaagagtatgatattcagagactattttcttccatgggggattaaattttcttac 800
Query: 601 cagtatatttaatattttttaatcaatgaatcacaataagcaggatgtactaagattcac 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 801 cagtatatttaatattttttaatcaatgaatcacaataagcaggatgtacgaagattcac 860
Query: 661 tgtgactttcaaa 673
|||||||||||||
Sbjct: 861 tgtgactttcaaa 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
