Query= MSMg01no277_a02.b1 MSMg01no277_a02.b1 CHROMAT_FILE:
MSMg01no277_a02.b1 PHD_FILE: MSMg01no277_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:03 2005
(322 letters)
>mm_chr8_99677991_99678713
Length = 723
Score = 571 bits (295), Expect = e-167
Identities = 316/323 (97%), Gaps = 1/323 (0%)
Strand = Plus / Minus
Query: 1 gtattttaacataaaatcttgggatagacattgtttatccttatccatgaatactatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 385 gtattttaacataaaatcttgggatagacattgtttatccttatccatgaatactgtata 326
Query: 61 gattcacatcatactatacatgtcacgatgatgtaaacatttgctagtcatgagcttaca 120
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 gatgcacatcatactatacatgtcacgatgatgtaaacatttgcttgtcatgagcttaca 266
Query: 121 ttctttaagga-tgaaaaccttagtgaccagcagctggagtaaggggctgcatcaaaaca 179
||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 ttctttaaggattaaaaaccttagtgagcagcagctggagtaaggggctgcatcaaaaca 206
Query: 180 tggcttttcatgtggtttgtgaattgtatcttgggtattctgagcttttgggctaatatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tggcttttcatgtggtttgtgaattgtatcttgggtattctgagcttttgggctaatatc 146
Query: 240 cacttatcagtgagtgcatatcatgtttgttcttttttgattgggttacctcactcaaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cacttatcagtgagtgcatatcatgtttgttcttttttgattgggttacctcactcaaga 86
Query: 300 tgatattctccagatgcatccat 322
|||||||||||||||| ||||||
Sbjct: 85 tgatattctccagatgtatccat 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 723
Length adjustment: 9
Effective length of query: 313
Effective length of database: 714
Effective search space: 223482
Effective search space used: 223482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_a02.g1 MSMg01no277_a02.g1 CHROMAT_FILE:
MSMg01no277_a02.g1 PHD_FILE: MSMg01no277_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:03 2005
(633 letters)
>mm_chr8_99506181_99507213
Length = 1033
Score = 1180 bits (610), Expect = 0.0
Identities = 628/634 (99%), Gaps = 2/634 (0%)
Strand = Plus / Plus
Query: 1 ctagttgacctccttgtaactgtcaatctatctcagtaggattttcactctgaatagtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagttgacctccttgtaactgtcaatctatctcagtaggattttcactctgaatagtgg 260
Query: 61 ttccctatcaccaggactttcaagccatcttctgagtataagaatgctttgccaacgtac 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccctatcaccaggactttcaagccatcttctgagtataagaatgctttgccaacgtac 320
Query: 121 actttagaataataaaggagaggaaggatatacatagtataagttaaaaatggtttgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttagaataataaaggagaggaaggatatacatagtataagttaaaaatggtttgaac 380
Query: 181 atggaaaggtgatttttaaaactagtgagattggttctgaatgaaatgtgcttgatagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggaaaggtgatttttaaaactagtgagattggttctgaatgaaatgtgcttgatagaa 440
Query: 241 aattattcaactggcaatttctatgttcacatgtaagatgcataaatttagtggacacaa 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 aattattcaactggcaatttctatgttcacatgtaaaatgcataaatttagtggacacaa 500
Query: 301 gagcaaatactaaactatgcaaattggtcagaagcataagatccccctggctatgaaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcaaatactaaactatgcaaattggtcagaagcataagatccccctggctatgaaata 560
Query: 361 cccatgtatc-tcctccaaattctcctgttaaatagtcacatgtttaatagaaaacacaa 419
|||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccatgtatcctc-tccaaatcctcctgttaaatagtcacatgtttaatagaaaacacaa 619
Query: 420 tgctttcctgggcaccattatgggcagattgttctatctctcaccataactggacaattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgctttcctgggcaccattatgggcagattgttctatctctcaccataactggacaattt 679
Query: 480 caccctaggtcttaaggtcaaactgtggatttacatttaagatgttaaatttgtaaagct 539
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 caccctaggtcttaaggtcaaactatggatttacatttaagatgttaaatttgtaaagct 739
Query: 540 tttaagaaatttatttggaattcccaaatcgatttagaaaagagtgactgaatgtttacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttaagaaatttatttggaattcccaaatcgatttagaaaagagtgactgaatgtttacc 799
Query: 600 aaaacagaaaaagagtgcataaactaatcttata 633
||||||||||||||||||||||||||||||||||
Sbjct: 800 aaaacagaaaaagagtgcataaactaatcttata 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
