XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGGC
CCATACCTAAACATAGTAAAAACAATATACAGCAAACCAGTAGTCAACAT
CAAACTCAATGGAAACAAACTTGAAGCAATCCCACTAAAATCAGGGCCTA
GACAAGGCTGCCCACTCTCTCCCTACCTTTCAATATAGTACTTGAAGTCC
TAACCAGAGCAATTAGACAACAAAAGGAGATCAAGGGGATACAGAATGGA
AAGGAAGAAGTCAAAATATCACTATTTGCAGATGGTATGATAGTATATAT
AAGTGACCCAAAAAACTCTACCAGAGAACTCCTAAACCTGATAAACAATT
TCAATGAATTATCTGGATATAAAATTAACTCAAACAAATCAGTGACCTTC
CTCTACAAAAAGGACAAACAAGCTGATAAAGAAATTAGAGAAACACCACC
CTTCATAATAGTCACAAATTATATAAAATACCTTGGTTTGACTCTAACTA
AGCAAGTAAAAATATCTGTCTGTATGACAAGAACTTCAAGTCTCTGAAGA
AAGAAATCGAAGAAGATCTCCGAAGATGGAAAAATCTCCTGTGCTCATGG
ATGGGCAGGATTAATGTAGTANAAATGTCAATCTTGCTGGAAGCAATCTA
CAAATTCAATGCAACCCCCATCAAAATCCCAACTCAATTCTTCAGAGTTA
AAAGGGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCA
AAAACTATTCTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTTCAAACACAAATGGGGGTGAT
TAGGAAGATTTTCAAAGTGATTACTACCTTGATTAAAATAACTCAAAGGT
ACAGATTACCTCACACAGGCTAGCTTCCTCTGATTTACATCCTGATTATA
GTTCTGTTACTCAATACTTAGACTTTTGGGCACTATCTTAAAACATAATG
TGAGATGGTGGGCAAAGGTTGATAATCAGATTGTGCCTTAACTCAAACTT
ACTGCATATGTGCAAATGCCCTGGTAGATTCTATTTCATGAGCATCTTTT
GACTCCTTTTTGAGGGATGATGACTATGGCCATTGAGCAGATTAAGGGAC
ATCAGTCAGGCATCAGTCATCCAAGATAGGCTCATAAATGGCGTGTTTCT
GGGAGTAGAAATGGAGTTTCCCTATAAGTTGGTGAGGGGCAAAATGAGAC
TATAGAGACACCTAGGCTTATTAAAATTATTAACAGGGCCAGAAGGAACT
TACTGGCCATGGCAGACCAAGAAAACGGTGAACTCTCTCACTTGTACCTC
TCTCATTTGTACCTCATAAGTTAATAGACACCTGTTACAGGGATTAATAA
CCTATAAGCAAAGGATTCCCAAACTGCTTTTGGAGCATCAGCTAGACTGG
ATCTCTTACTGTTGACTTGATCATCTCCCATGCTGCCCATGTACTACTTT
GTCCATCTAGACCTGGAACN

Query= MSMg01no277_f24.g1 MSMg01no277_f24.g1 CHROMAT_FILE:
MSMg01no277_f24.g1 PHD_FILE: MSMg01no277_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:30 2005
         (694 letters)



>mm_chr8_43115305_43116398
          Length = 1094

 Score = 1301 bits (673), Expect = 0.0
 Identities = 688/693 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agttcaaacacaaatgggggtgattaggaagattttcaaagtgattactaccttgattaa 60
           ||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||
Sbjct: 893 agttcaaacacaaatgggggtgattaggaagattttcaaagtgagaactatcttgattaa 834

                                                                       
Query: 61  aataactcaaaggtacagattacctcacacaggctagcttcctctgatttacatcctgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 aataactcaaaggtacagattacctcacacaggctagcttcctctgatttacatcctgat 774

                                                                       
Query: 121 tatagttctgttactcaatacttagacttttgggcactatcttaaaacataatgtgagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tatagttctgttactcaatacttagacttttgggcactatcttaaaacataatgtgagat 714

                                                                       
Query: 181 ggtgggcaaaggttgataatcagattgtgccttaactcaaacttactgcatatgtgcaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ggtgggcaaaggttgataatcagattgtgccttaactcaaacttactgcatatgtgcaaa 654

                                                                       
Query: 241 tgccctggtagattctatttcatgagcatcttttgactcctttttgagggatgatgacta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 653 tgccctggtagattctatttcatgagcatcttttgactcctttttgagggaggatgacta 594

                                                                       
Query: 301 tggccattgagcagattaagggacatcagtcaggcatcagtcatccaagataggctcata 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tggtcattgagcagattaagggacatcagtcaggcatcagtcatccaagataggctcata 534

                                                                       
Query: 361 aatggcgtgtttctgggagtagaaatggagtttccctataagttggtgaggggcaaaatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aatggcgtgtttctgggagtagaaatggagtttccctataagttggtgaggggcaaaatg 474

                                                                       
Query: 421 agactatagagacacctaggcttattaaaattattaacagggccagaaggaacttactgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agactatagagacacctaggcttattaaaattattaacagggccagaaggaacttactgg 414

                                                                       
Query: 481 ccatggcagaccaagaaaacggtgaactctctcacttgtacctctctcatttgtacctca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ccatggcagaccaagaaaacggtgaactctctcacttgtacctctctcatttgtacctca 354

                                                                       
Query: 541 taagttaatagacacctgttacagggattaataacctataagcaaaggattcccaaactg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 taagttaatagacacctgttacagggattaataacctataagcaaaggattcccaaactg 294

                                                                       
Query: 601 cttttggagcatcagctagactggatctcttactgttgacttgatcatctcccatgctgc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cttttggagcatcagctagactggatctcttactgttgacttgatcatctcccatgctgc 234

                                            
Query: 661 ccatgtactactttgtccatctagacctggaac 693
           |||||||||||||||||||||||||||||||||
Sbjct: 233 ccatgtactactttgtccatctagacctggaac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space:   741456
Effective search space used:   741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)