Query= MSMg01no278_k23.b1 MSMg01no278_k23.b1 CHROMAT_FILE:
MSMg01no278_k23.b1 PHD_FILE: MSMg01no278_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:05 2005
(325 letters)
>mm_chr8_108357228_108357951
Length = 724
Score = 447 bits (231), Expect = e-130
Identities = 249/255 (97%), Gaps = 1/255 (0%)
Strand = Plus / Minus
Query: 71 ctgatacacacagcagactgctgatgaaatggaagtccattcccgaaaggtgagttacaa 130
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctgatacacacagctg-ctgctgatgaaatggaagtccattcccgaaaggtgagttacaa 466
Query: 131 agtgaagggtgtggagggaaggggctgagtcttttctgcctagaacagcttgggcccact 190
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agtgaagggtgcggagggaaggggctgagtcttttctgcctagaacagcttgggcccact 406
Query: 191 ttcagatcagcgggaaggatgagcctgcctcaccttctcttccagagcatggggaacctg 250
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttcagatcagtgggaaggatgagcctgcctcaccttctcttccagagcatggggaacctg 346
Query: 251 gcttctgggagggagtcacatttctctgattgggaagaagctagtctgctaggttatgct 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gcttctgggagggagtcacatttctctgattgggaagaagctagtctgctaggttatgct 286
Query: 311 tttgttttgtatgtg 325
|||| |||||||||
Sbjct: 285 tttgggttgtatgtg 271
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_k23.g1 MSMg01no278_k23.g1 CHROMAT_FILE:
MSMg01no278_k23.g1 PHD_FILE: MSMg01no278_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:05 2005
(285 letters)
>mm_chr8_108285667_108286349
Length = 683
Score = 489 bits (253), Expect = e-143
Identities = 272/279 (97%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 4 ttccaggggatctgacactcttttctgatcttcaagggcatccggtgcacatgttaccta 63
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 204 ttccaggggatctgacactcttttctgatcttcaagggcatcaggtgcacatgttaccta 263
Query: 64 gatatacatgcaggcacacatcaatacacataaaataaggtttaaacaaacagaaggaag 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatatacatgcaggcacacaccaatacacataaaataaggtttaaacaaacagaaggaag 323
Query: 124 tctgtgtgtttttttttgggaagaacattcacatcattctggaggcctcagcgagatgga 183
|||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 tctgtgtg--ttttcttgggaagaacattcacaacattctggaggcctcagcgagatgga 381
Query: 184 cgtccaaatccaaaagagttattatcaagcacctttcctagaccagccctgtaaatgatg 243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cgtccaaatccaaaagagtcattatcaagcacctttcctagaccagccctgtaaatgatg 441
Query: 244 ctgtacaactgtagccatcaattcagcaatcctcctgtc 282
|||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgtacaactgtagccatcaattcagcaatcctcctgtc 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 683
Length adjustment: 9
Effective length of query: 276
Effective length of database: 674
Effective search space: 186024
Effective search space used: 186024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
