Query= MSMg01no280_h02.b1 MSMg01no280_h02.b1 CHROMAT_FILE:
MSMg01no280_h02.b1 PHD_FILE: MSMg01no280_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:17 2005
(239 letters)
>mm_chr8_88671486_88672124
Length = 639
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%)
Strand = Plus / Plus
Query: 1 caaatgatgtagaatggcttacctgttcctggtattgcagtctcagctctatgtctggcc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatgatgtagaatggcttatctgttcctggtattgcagtctcagctctatgtctggcc 260
Query: 61 gcctctcagaacttcctccagagcacctacagctcctagggtccctagaaactctaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctctcagaacttcctccagagcacctacagctcctagggtccctagaaactctaagct 320
Query: 121 gggccctcaggcctctgctatggcctttaaaagaaaaacagaaatatgagaaggaactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggccctcaggcctctgctatggcctttaaaagaaaaacagaaatatgagaaggaactta 380
Query: 181 atcacatgtgcttgacctgttaactgcaatcaactgtttatggcattcagttgtaa 236
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcacatgtgcttgacctggtaactgcaatcaactgtttatggcattcagttgtaa 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_h02.g1 MSMg01no280_h02.g1 CHROMAT_FILE:
MSMg01no280_h02.g1 PHD_FILE: MSMg01no280_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:17 2005
(214 letters)
>mm_chr8_88837977_88838590
Length = 614
Score = 333 bits (172), Expect = 6e-96
Identities = 200/214 (93%), Gaps = 8/214 (3%)
Strand = Plus / Minus
Query: 1 ccaggcaatcagagaaagactcataggaaaagacataggtggttgttggctccagtccta 60
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 306 ccaggcaatcagagaaagactcataggaaaagacataggtggttgcaggctgaagtccta 247
Query: 61 cagctggcatgctaagggttgaatatgcccagagatacatcctacactgtgtgtgtgtgt 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 246 cagctggcatgctaagggttgaatatgcccagagatacatcctaca--------gtgtgt 195
Query: 121 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgccataacacaggaaatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgccataacacaggaaatgtt 135
Query: 181 atcttcttcaaaaaaagactatggtctttctgag 214
||||||||||||||||||| |||| |||||||||
Sbjct: 134 atcttcttcaaaaaaagacaatggcctttctgag 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
