TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATTCCCTACCACCTCCTCCACAAGGGTGTCCTCTGTTTACATAT
ACCCACCATGGCACATGCTACACACACACACACACATATGCACACAAATG
CATATAAACATACATGCACAGGCAGACACACACACGCATGCACACACGCA
CACACACACATTCATGCACATGCACACACATGCATGCACACACACACAAG
CATGCACATACATATGCATACGCACACACACACACACACACACACACACA
CACACACACTTAAAATTCTGTATTTCTGAACACCTCTTCTTCAGCTGAGC
TCACAATGATGGGGCATGTGCCAGCACTGAATCAGAATCCTGGAGTGTAC
CCCACATCAGTGCTTACCACCGCCCCACTGAGCAGGCAGCACATCCTCAT
TTTGCAAATGAAGAATCTGCTGTCTCACTTAGGGTTTCTATTACTGTGAT
AAACACCACGACCATAAACAAGTCAGAGAGAAAAGGTTTTATTACACCTT
ACAACTCTCAGGTTACACACCATTGCTAAGGAACTTCAGGGCAGGAACTC
AAACAGGGAAGGGACCTGGAAGAAGGAGATGACTCAGAGGCCATACACGA
ATGTTGCTTACTGGCTTGCTCAGCCTAGTTTTTACAACCCTCAGGATTAC
CAGGCCAGAGGATCACCCACAGTGCTGGGTCCTACAGTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGAATGGGTGTT
GGATCTTTTTAAACGCTTTTTCTGCATCTAACGAGATGATCATGTGGATT
TTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTCGTAT
ATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGA
TGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGG
ATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTT
TGTTGGGTCTTTCTGTGGCTTAGGTATCAGAGTAATAGTGGCTTCATAAA
ATGAGCCCCCCAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTTGTGC
AGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAA
CCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTAATAACTGCTT
CTATTTCTTTAGGTGATATGGGACTGTTTAGATGGTCAACTTGATCCTGA
TTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAG
GTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGT
TTTGGATTTCTTCAGGATCTGTTGTTATGTCTCCC

Query= MSMg01no289_a05.b1 MSMg01no289_a05.b1 CHROMAT_FILE:
MSMg01no289_a05.b1 PHD_FILE: MSMg01no289_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:14 2005
         (667 letters)



>mm_chr8_36725860_36726925
          Length = 1066

 Score = 1266 bits (655), Expect = 0.0
 Identities = 664/667 (99%), Gaps = 1/667 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcctccacaagggtgtcctctgtttacatatacccaccatggcacatgctacacacaca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 833 ctcctccacaagggtgtcctctgtttacatatacccaccatggcacatgcaacacacaca 774

                                                                       
Query: 61  cacacacatatgcacacaaatgcatataaacatacatgcacaggcagacacacacacgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 cacacacatatgcacacaaatgcatataaacatacatgcacaggcagacacacacacgca 714

                                                                       
Query: 121 tgcacacacgcacacacacacattcatgcacatgcacacacatgcatgcacacacacaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tgcacacacgcacacacacacattcatgcacatgcacacacatgcatgcacacacacaca 654

                                                                       
Query: 181 agcatgcacatacatatgcatacgcacacacacacacacacacacacacacacacacaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 agcatgcacatacatatgcatacgcacacacacacacacacacacacacacacacacaca 594

                                                                       
Query: 241 cttaaaattctgtatttctgaacacctcttcttcagctgagctcacaatgatggggcatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cttaaaattctgtatttctgaacacctcttcttcagctgagctcacaatgatggggcatg 534

                                                                       
Query: 301 tgccagcactgaatcagaatcctggagtgtaccccacatcagtgcttaccaccgccccac 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 533 tgccagcactgaatcagaatcctggagtgtaccccacatcagtgcttacca-tgccccac 475

                                                                       
Query: 361 tgagcaggcagcacatcctcattttgcaaatgaagaatctgctgtctcacttagggtttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgagcaggcagcacatcctcattttgcaaatgaagaatctgctgtctcacttagggtttc 415

                                                                       
Query: 421 tattactgtgataaacaccacgaccataaacaagtcagagagaaaaggttttattacacc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tattactgtgataaacaccacgaccataaacaagtcagagagaaaaggttttattacacc 355

                                                                       
Query: 481 ttacaactctcaggttacacaccattgctaaggaacttcagggcaggaactcaaacaggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttacaactctcaggttacacaccattgctaaggaacttcagggcaggaactcaaacaggg 295

                                                                       
Query: 541 aagggacctggaagaaggagatgactcagaggccatacacgaatgttgcttactggcttg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aagggacctggaagaaggagatgactcagaggccatacacgaatgttgcttactggcttg 235

                                                                       
Query: 601 ctcagcctagtttttacaaccctcaggattaccaggccagaggatcacccacagtgctgg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ctcagcctagtttttacaaccctcaggattaccaggccagaggatcacccacagtgctgg 175

                  
Query: 661 gtcctac 667
           |||||||
Sbjct: 174 gtcctac 168


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 11
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1066
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1056
Effective search space:   693792
Effective search space used:   693792
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)