Query= MSMg01no289_b17.b1 MSMg01no289_b17.b1 CHROMAT_FILE:
MSMg01no289_b17.b1 PHD_FILE: MSMg01no289_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:21 2005
(310 letters)
>mm_chr8_35256228_35256937
Length = 710
Score = 567 bits (293), Expect = e-166
Identities = 305/309 (98%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 1 catgataggacatatttacagcacaaaacaattctcaatgagcttttagcagataaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 catgataggacatatttacagcacaaaacaattctcaatgagcttttagcagataaagca 294
Query: 61 caccgagtatcttctctggccccatcaataaaagaaaaaaaaagtctaggaaattgatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 caccgagtatcttctctggccccatcaataaaagaaaaaaaaagtctaggaaattgatga 234
Query: 121 ctatgtggaaattatataaaacactgctagactggcagtggtgtcgcacgtctttaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ctatgtggaaattatataaaacactgctagactggcagtggtgtcgcacgtctttaatcc 174
Query: 181 cagcacctgggaggcagaggcaagcggatttctgagttcgaggccagtctggtctactaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 173 cagcacctgggaggcagaggcaagcggatttctgagttcgaggccagtctggtctacaaa 114
Query: 241 gtgaattccaggacagccagggctacacagagaaaccctgtctcaaaaaaacccaacaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 113 gtgaattccaggacagccagggctacacagagaaaccctgtctcaaaaaaacaaaacaaa 54
Query: 301 accaaaaaa 309
|| ||||||
Sbjct: 53 ac-aaaaaa 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_b17.g1 MSMg01no289_b17.g1 CHROMAT_FILE:
MSMg01no289_b17.g1 PHD_FILE: MSMg01no289_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:21 2005
(629 letters)
>mm_chr8_35073312_35074340
Length = 1029
Score = 1208 bits (625), Expect = 0.0
Identities = 628/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 1 agtacatattccaggctggccctgagctcctggcaatccttctgcctcacgctccctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 202 agtacatattccaggctggccctgagctcctggcaatccttctgcctca-gctccctgag 260
Query: 61 ggctaggattacaagtgagagcgaccaccattggttgatgattaatttagttttgctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctaggattacaagtgagagcgaccaccattggttgatgattaatttagttttgctttt 320
Query: 121 actggtggatgctgtaaactcaggttttccttcttgacatgtaaatggtttaccgtgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggtggatgctgtaaactcaggttttccttcttgacatgtaaatggtttaccgtgaac 380
Query: 181 atcacccactgttttgtaaatgtatccatataagcagggaccaaagagtccttatctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcacccactgttttgtaaatgtatccatataagcagggaccaaagagtccttatctctc 440
Query: 241 tcctcagagattaaacacttgccaaaacattgttctttgatgtctgtgcatctccctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctcagagattaaacacttgccaaaacattgttctttgatgtctgtgcatctccctttc 500
Query: 301 cccttacttctaaaattatatttgagatctgagactggaagctccttgggaatagctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccttacttctaaaattatatttgagatctgagactggaagctccttgggaatagctttg 560
Query: 361 tagccaagcgattcatttcctggctggcctgtgccatggtctacagtctcctttaaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagccaagcgattcatttcctggctggcctgtgccatggtctacagtctcctttaaaaca 620
Query: 421 tgatagcgtctcccctctcttagcaacagctatgtgctggcccagcatacaggcaactct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgatagcgtctcccctctcttagcaacagctatgtgctggcccagcatacaggcaactct 680
Query: 481 ccgggtaggttactattagccaaaacatacaggtggagggagcacagacatacaagtgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccgggtaggttactattagccaaaacatacaggtggagggagcacagacatacaagtgac 740
Query: 541 tcagcacatggtcatgaagttgggctgggggcacttggtgttgtgatcatagaaagagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcagcacatggtcatgaagttgggctgggggcacttggtgttgtgatcatagaaagagaa 800
Query: 601 agggtattaatatatgttctatctaggtg 629
|||||||||||||||||||||||||||||
Sbjct: 801 agggtattaatatatgttctatctaggtg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
