NCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTGATCTTTACCAAATCAGCATACTAATTTCTCTCCACAG
CTGCAGGGTTGGTACAGGGAACTTGGCCCATCAAAAGTAGGTGGATCTCT
GTGAGTTCAAGGCCAGCCTAGTGTTCTGGAGCACTTTTTCGCCCCCAAGA
CAGGGTTTCTTTGTGCAGTCCTAGCTGTCCTGGAACTCACTCTGTAGACC
TGGCCTCTGGAGCACTTTGGTGGAGCACGCCTTTAATCCCAGCACTTGGG
AGGCAGGCGGATTTCTGAGNTTGATTTTTTTCTGGTCTACAGAGTGAGTT
CGAGACCAGCCATTTTTGTACTTTTCCCCCCCCCCCCACAAANTNATAAN
CATCCAAANNGAGGGGGGGCCCCCCCCTCTGAAAAAAAAAAAAAGAGNGA
GGGGGGGGCGCATTTCTCCCTGGTTCTCTAAAGTGTAGGGGTTCGTAGGT
TTACGGGAAGGAACCGAGAGGTCATTTATAAACTCTTTGCTGCGTTTCCC
CTAAGATAGCCTTACATGTGGGCGTCTTATTCCAATGTTTCTCAATATTT
TAAAGGAAGACCAAATTATCAAGGTTTGGATTTTATACCTGTTTTATATT
ATTCGTCACAACCCCGGGTTCCACAGTAATTAATATCTTTAGTCTTTTAA
ACTTTTTTTTGCCATTCTATATCGTTTTTTTGT

NCCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGCTTGAGTCCAAAGGCCC
CCAAACCAAGATCGTCAACGCTTGGCCAGGAGAAGGTTCTGGCTCAGGAA
AAGTGGGGGTTGGGACCTTACTAGGCCTCTCTTCGTCATGGAAAATAATA
AAGCCCCATCTTTTAATATGAGCATCTGTCATTTTTATATCAAAACCCTC
TTTCATAACTCTTCCAATGATCTAATAACTTTAAATGACTATTAGCTCTT
GGTTACAATTGCTTTACAAAGAGAAAATTGGAAAATACCTTGTTTGCTGG
AAATCCCCATTTTAATTGACTTCAATCGTTTGCTATCACAGGTAGCAATC
TGTTTCTATGTGAACCTTGCCCCCCCGCTTCTTCTTCTGTCTCTTTTTCC
TTTTATTTTTTTTAAAATTTATTTATTTATTATATGTAGTACACTGTAGC
AGTCTTCAGACACTCCAGAAGAGGGCATCAGATCTCATTACAGATGGATG
TGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTCAGAAGAG
CATTCGGTGGTCTTAACCGCTGAGCCATCTCACCAGCCCCCCTTTTATAT
TTTTTAACTCCAGTGTTTATTCCTGTTGCCAAGGAGTTGGATATTTCCTG
AC

Query= MSMg01no289_j17.g1 MSMg01no289_j17.g1 CHROMAT_FILE:
MSMg01no289_j17.g1 PHD_FILE: MSMg01no289_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:57 2005
         (525 letters)



>mm_chr8_32381766_32382690
          Length = 925

 Score =  948 bits (490), Expect = 0.0
 Identities = 513/526 (97%), Gaps = 10/526 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   gagaaggttctggctcaggaaaagtgggggttgggaccttactaggcctctcttcgtcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gagaaggttctggctcaggaaaagtgggggttgggaccttactaggcctctcttcgtcat 462

                                                                       
Query: 61  ggaaaataataaagccccatcttttaatatgagcatctgtcatttttatatcaaaaccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggaaaataataaagccccatcttttaatatgagcatctgtcatttttatatcaaaaccct 402

                                                                       
Query: 121 ctttcataactcttccaatgatctaataactttaaatgactattagctcttggttacaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctttcataactcttccaatgatctaataactttaaatgactattagctcttggttacaat 342

                                                                       
Query: 181 tgctttacaaagagaaaattggaaaataccttgtttgctggaaatccccattttaattga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgctttacaaagagaaaattggaaaataccttgtttgctggaaatccccattttaattga 282

                                                                       
Query: 241 cttcaatcgtttgctatcacaggtagcaatctgtttctatgtgaaccttg-----ccccc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct: 281 cttcaatcgtttgctatcacaggtagcaatctgtttctatgtgaaccttggtttt----- 227

                                                                       
Query: 296 ccgcttcttcttctgtctctttttccttttattttttttaaaatttatttatttattata 355
           | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctgtttcttcttctgtctctttttccttttattttttttaaaatttatttatttattata 167

                                                                       
Query: 356 tgtagtacactgtagcagtcttcagacactccagaagagggcatcagatctcattacaga 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tgtagtacactgtagcagtcttcagacactccagaagagggcatcagatctcattacaga 107

                                                                       
Query: 416 tggatgtgagccaccatgtggttgctgggatttgaactcaggacctttcagaagagcatt 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tggatgtgagccaccatgtggttgctgggatttgaactcaggacctttcagaagagcatt 47

                                                         
Query: 476 cggtggtcttaaccgctgagccatctcaccagccccccttttatat 521
           ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 46  cggtggtcttaaccgttgagccatctcaccagccccccttttatat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space:   471225
Effective search space used:   471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)