Query= MSMg01no290_a18.b1 MSMg01no290_a18.b1 CHROMAT_FILE:
MSMg01no290_a18.b1 PHD_FILE: MSMg01no290_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:29 2005
(423 letters)
>mm_chr8_93540844_93541667
Length = 824
Score = 731 bits (378), Expect = 0.0
Identities = 408/420 (97%), Gaps = 5/420 (1%)
Strand = Plus / Minus
Query: 5 gaattcttatgataccgcaaggaattggtgggtagaggaagcaccatggatacctatgaa 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaattcttatgagaatgcaaggaattggtgggtagaggaagcaccatggatacctatgaa 742
Query: 65 agacaacattttaacaagcaaagagagaaagaacaaaggaaagaaagaaagaaagaaaga 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agacaacattttaagaagcaaagagagaaagaacaaaggaaagaaagaaagaaagaaaga 682
Query: 125 aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa----gga 626
Query: 185 aggttggttgactgtgtaactgtgtatgctaagaaatacttttgtgcaatcatgttagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aggttggttgactgtgtaactgtgtatgctaagaaatacttttgtgcaatcatgttagaa 566
Query: 245 tgggctgatgataaaaaa-gtgcaaacaaagaagtagaatcagaaaatccaggagcctgt 303
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 565 tgggctgatgataaaaaaagtgcaaacaaagaagtagaaacagaaaatccaggagcctgt 506
Query: 304 tgcgaagggaagcattaatacagagatagacactatggaagttcttttccttttatcata 363
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcgaagggaagcattaaaacagagatagacactatggaagttcttttccttttatcata 446
Query: 364 agtaatatgaacacgtgtgtacgcaagaggtaggaaggatggggaaggaggaagagaagg 423
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 agtaatatgaacacgtgtgtacgcaagagggaggaaggatggggaaggaggaagagaagg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 85
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_a18.g1 MSMg01no290_a18.g1 CHROMAT_FILE:
MSMg01no290_a18.g1 PHD_FILE: MSMg01no290_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:29 2005
(486 letters)
>mm_chr8_93368253_93369138
Length = 886
Score = 932 bits (482), Expect = 0.0
Identities = 485/486 (99%)
Strand = Plus / Plus
Query: 1 tgtgccccgccagccgtcagttcacatgattccttatccttaccccctccaacccaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgccccgccagccgtcagttcacatgattccttatccttaccccctccaacccaccag 260
Query: 61 accctccccttctgctgtgacaagcagcatgtcccctttccctccttggagcaggcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accctccccttctgctgtgacaagcagcatgtcccctttccctccttggagcaggcagag 320
Query: 121 tcactgacacactcctaccttgcattacctaaccacctcagaccctgtgacaggcagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcactgacacactcctaccttgcattacctaaccacctcagaccctgtgacaggcagggc 380
Query: 181 tgcaggcctgccctgggcaaggctctccctcccctctcatctctctctctcctgcctgtc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tgcaggcctgccctgggcaaggctctccctcccctctcatctctctctctcctgcctgcc 440
Query: 241 agcactgacctcctggtacaagcctgtggggcttggcacctgtggtgagctttgacaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcactgacctcctggtacaagcctgtggggcttggcacctgtggtgagctttgacaaga 500
Query: 301 caaagactctgtgtcacttccattaattatgtttgcgtgtggctatgaattttctgatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaagactctgtgtcacttccattaattatgtttgcgtgtggctatgaattttctgatgg 560
Query: 361 taaaaatggatgtcacaaaatttacaattttagcttctattgaggtggctctcttgcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaaatggatgtcacaaaatttacaattttagcttctattgaggtggctctcttgcctg 620
Query: 421 aacccggggagtcgtctgtactgggtatgtgttctgtgtcagagctgtgttgctacctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacccggggagtcgtctgtactgggtatgtgttctgtgtcagagctgtgttgctacctgc 680
Query: 481 ttgaag 486
||||||
Sbjct: 681 ttgaag 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
