Query= MSMg01no290_f06.b1 MSMg01no290_f06.b1 CHROMAT_FILE:
MSMg01no290_f06.b1 PHD_FILE: MSMg01no290_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:50 2005
(236 letters)
>mm_chr8_110192645_110193282
Length = 638
Score = 321 bits (166), Expect = 2e-92
Identities = 199/212 (93%), Gaps = 4/212 (1%)
Strand = Plus / Minus
Query: 1 tgcttaggggtataaacagaaagaaaaaggtaaccttattcacaagagatcaaaaccaat 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 410 tgcttaggggtataaacagaaagaaaaaggtaaccttattcacaagaaatcaaaacaaat 351
Query: 61 ttaaacaaaggaatgtttcaactgccttatcattaacaattaaagaagattctagattca 120
|||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||
Sbjct: 350 ttaaacaaaggaatgtttcaaccacctcatcattaacaattaaagaagactctagattca 291
Query: 121 ttattggaacgagtatgtgaaattaggctttcctgcacaaactgggacagaccaaaccag 180
||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 290 ttattggaaagagtatgtgaagttaggctttcctgcacagactgggacagaccaaaccag 231
Query: 181 cacagcttttagagt----taaaaaaaaaaaa 208
||||||||||||||| |||||||||||||
Sbjct: 230 cacagcttttagagtaaagtaaaaaaaaaaaa 199
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 638
Length adjustment: 9
Effective length of query: 227
Effective length of database: 629
Effective search space: 142783
Effective search space used: 142783
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_f06.g1 MSMg01no290_f06.g1 CHROMAT_FILE:
MSMg01no290_f06.g1 PHD_FILE: MSMg01no290_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:50 2005
(286 letters)
>mm_chr8_110015128_110015813
Length = 686
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%)
Strand = Plus / Plus
Query: 1 tgtgcactgtggggccactttcacactggtttcattgactcagagtacccctgatttccg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgtgcactgtggggccactttcacactggtttcattgactcagagtacagttgatttccg 260
Query: 61 ttgaatactgaatagtattccagtgtttgcatccagcatgtttgatttatctactcactt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaatactgaatagtatttcagtgtttgcatccagcatgtttgatttatctactcactt 320
Query: 121 actgaagcgtaccttagttgatcctaagttttgctaactatgaataaagctgcagttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgaagcgtaccttagttgatcctaagttttgctaactatgaataaagctgcagttagc 380
Query: 181 attggcttctcagcagtgcagcctttatacacagaactttcccaaaagggaggctgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attggcttctcagcagtgcagcctttatacacagaactttcccaaaagggaggctgggag 440
Query: 241 tcctctggtgcctgcgagaggggagctatgtgggaatgcccggca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctctggtgcctgcgagaggggagctatgtgggaatgcccggca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
