Query= MSMg01no290_h21.b1 MSMg01no290_h21.b1 CHROMAT_FILE:
MSMg01no290_h21.b1 PHD_FILE: MSMg01no290_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:04 2005
(597 letters)
>mm_chr8_81720070_81721066
Length = 997
Score = 1147 bits (593), Expect = 0.0
Identities = 596/597 (99%)
Strand = Plus / Plus
Query: 1 ggaaaaagcaactctgtttttcaagccatgatgggctcagggatgaaaaatggactaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaaaaagcaactctgtttttcaagccatgatgggctcagggatgaaaaatggactaaaa 260
Query: 61 atattttcctccccacaccagagtttgagatacctgatattgttctctttgggtcacgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattttcctccccacaccagagtttgagatacctgatattgttctctttgggtcacgct 320
Query: 121 ttgactgcctgagtcaccatggggttggcttagacagcttaaacaacttgtacttacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgactgcctgagtcaccatggggttggcttagacagcttaaacaacttgtacttacttc 380
Query: 181 atctggctaaataggttagaagcaagaccctcggggatgtcaggaccttgccctccccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctggctaaataggttagaagcaagaccctcggggatgtcaggaccttgccctccccag 440
Query: 241 tctcctccctctcattctgcgccccttcacttcccaccacccggctgctccagttcctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcctccctctcattctgcgccccttcacttcccaccacccggctgctccagttcctgc 500
Query: 301 tgtgactaatgggacagctgagctctctaccaagagtagtcatatgctttctgcagaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgactaatgggacagctgagctctctaccaagagtagtcatatgctttctgcagaaga 560
Query: 361 atgtcttagcaggtgccatgaagttattttaatttcagcttgatgaattgttaagtatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtcttagcaggtgccatgaagttattttaatttcagcttgatgaattgttaagtatta 620
Query: 421 tgacctgcccacttgctcaagactctcagtccatgaactgcaggtacattagaaaaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgacctgcccacttgctcaagactctcagtccatgaactgcaggtacattagaaaaacta 680
Query: 481 gcttgtaggcacatcacatgtttccacaaggaagtgacatcccatgtgttcacagggaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttgtaggcacatcacatgtttccacaaggaagtgacatcccatgtgttcacagggaag 740
Query: 541 tgataccagaatatatgcatacactaggatcaagtctctgaggctctttccaatcca 597
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgataccagaatatgtgcatacactaggatcaagtctctgaggctctttccaatcca 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_h21.g1 MSMg01no290_h21.g1 CHROMAT_FILE:
MSMg01no290_h21.g1 PHD_FILE: MSMg01no290_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:04 2005
(291 letters)
>mm_chr8_81878477_81879167
Length = 691
Score = 252 bits (130), Expect = 3e-71
Identities = 139/142 (97%)
Strand = Plus / Minus
Query: 1 actcttgtccgtggctgccagggttcaaagcaccactgagaagagcaaagcgaccgggca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 555 actcttgtccgtggctgccagggttcaaagcaccactgagaagagcaaagagaccgggca 496
Query: 61 cgctctagtggagatagagcaaagagaaagggtgcacactagcggagatagagcaaagag 120
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 495 cgctctagcggagatagagcaaagagaaagggtgcgcactagcggagatagagcaaagag 436
Query: 121 aaagggtgcgcactagcggaga 142
||||||||||||||||||||||
Sbjct: 435 aaagggtgcgcactagcggaga 414
Score = 246 bits (127), Expect = 1e-69
Identities = 147/155 (94%), Gaps = 5/155 (3%)
Strand = Plus / Minus
Query: 139 gagatagagcaaagagaaagggtgca--cactagcggagatagagcaaagagaaagggtg 196
|||| |||||||||||| || ||| | ||||||||||||||||||||||||||||||
Sbjct: 518 gaga-agagcaaagagaccgg--gcacgctctagcggagatagagcaaagagaaagggtg 462
Query: 197 cgcactagcggagatagagcaaagagaaagggtgcgcactagcggagacacccgaacacg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cgcactagcggagatagagcaaagagaaagggtgcgcactagcggagacacccgaacacg 402
Query: 257 atcagtaaagacctggccacttggagccctgttgg 291
|||||||||||||||||||||||||||||||||||
Sbjct: 401 atcagtaaagacctggccacttggagccctgttgg 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 2
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
