TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCATCAAATATCTTATCAGTGAGGCTGTCAATTCTCATTTCATCA
TGGAATGAAATATTTCACATTAGTTTGCTGTGCGTAGGAAGAATGTAGAA
TGTGGCTTTGTCCCTGTGGTGTCTGATTTGATAGCGCATAAACCCAAGCT
ACACTTTGATCCATCCATACTTTTTATTCATAGATTCAGGATATAAATAT
TTCACTGTCATAAAGAAGAAAAGTCCACTGAGATTAGCATTTCTGTTGCG
GAATCACCACTAATGCAGACAATAAATCCAGTTCTATACATCTCAGCTTA
TTCATGCTGAATCCTGGGGGAGCACAAAGTGCTCTCCAGGATGCATGTAC
TTTTGTCTCAGTAGCCACCCGACTAACCAATAGACTAGTCATGTGTAAAG
CTGCCATGAATCTCCACTGTAATTCCAAAGCCAGTAAGCAACCTTTCCCA
AATCCAACCCTGATTAACATACATATTTTATATCTGACCTCTAATGCTCT
TACTATAATTAAAAGTACCTTAAACATAAGTTACCATCAACAATGATATG
TTGGCTTGACAGCATTTTCCCTTAGTTTGAGGAGTGCTGTCTACCCCGAT
AAGCTGGCTTTTTGCTGAAGTGCGCTTGTTAGTCTTCCCCCTTGTTTTCC
TCTTGAACTTCAGCCTTTGTGCTGACGCTATTAATCN

TGGCGGCCGCCTGGCTTCCGCATTTGGGNNGAACANAGAAGGATTGCGGC
ACTCAGGGNNNNNNACNANANGGCATNNGAGAGCNCCGCGGGANATTTTG
NTACGAAANGACATTGGNGNNCNCNNANGGNCNGNANAANATCGGNCCAA
GAACTTCTGGCTTTCATAGTCTCTGGGGAGAAGTCAGGTGTAATTCTAAT
AGGTCTGCCTTTATATGTTACTTGACCCTTTTTCTTTTCTGCTTTTAATA
TTCTATCTTTGTTAATGCATTTGGCGTTTTGACTATTATGCATTGGGAGT
TTTTTTTTTTCGGGCCCAGACAAACAGGAGCACAGAAGGCTTTTTTTTTG
TTCCCCCCCCCTTTTTTCTTTAGTTTAGGGAAGTTTTCTTCTATAACCCC
GTTGAAGAAAAAAAATGGACTTTTAAGAGCGATAGGCTCATTGGTCCTGC
TATCTTTATCTCGCCCCATTACTGGGGAACATTTCGGTTATGATGTGGGA
ACGCCTGGCTCAGTATGTGCTATGGCTTTCGTCATATCTTGCAAACGCTA
ATGAAACAACCACCAACCCTACTCGGTTCACTTATCTCATATTCCCTGGT
TCCTCAAACACCCTCTAGTTAGGCTTACTCAACGAAGTCCTGCTTTTTTT
GTGTGTTTACTGGTCACACATTCTTTGTCATTTCACTTTCTCTCTGTGTG
TTCTGTCCTTGTTTTTCTTT

Query= MSMg01no291_n01.b1 MSMg01no291_n01.b1 CHROMAT_FILE:
MSMg01no291_n01.b1 PHD_FILE: MSMg01no291_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:42 2005
         (533 letters)



>mm_chr8_83911846_83912778
          Length = 933

 Score =  992 bits (513), Expect = 0.0
 Identities = 525/529 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaccatcaaatatcttatcagtgaggctgtcaattctcatttcatcatggaatga 64
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gaattcaccatcaaaaattttatcagtgaggctgtcaattctcatttcatcatggaatga 674

                                                                       
Query: 65  aatatttcacattagtttgctgtgcgtaggaagaatgtagaatgtggctttgtccctgtg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aatatttcacattagtttgctgtgcgtaggaagaatgtagaatgtggctttgtccctgtg 614

                                                                       
Query: 125 gtgtctgatttgatagcgcataaacccaagctacactttgatccatccatactttttatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtgtctgatttgatagcgcataaacccaagctacactttgatccatccatactttttatt 554

                                                                       
Query: 185 catagattcaggatataaatatttcactgtcataaagaagaaaagtccactgagattagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 catagattcaggatataaatatttcactgtcataaagaagaaaagtccactgagattagc 494

                                                                       
Query: 245 atttctgttgcggaatcaccactaatgcagacaataaatccagttctatacatctcagct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atttctgttgcggaatcaccactaatgcagacaataaatccagttctatacatctcagct 434

                                                                       
Query: 305 tattcatgctgaatcctgggggagcacaaagtgctctccaggatgcatgtacttttgtct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tattcatgctgaatcctgggggagcacaaagtgctctccaggatgcatgtacttttgtct 374

                                                                       
Query: 365 cagtagccacccgactaaccaatagactagtcatgtgtaaagctgccatgaatctccact 424
           ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cagtagccaactgactaaccaatagactagtcatgtgtaaagctgccatgaatctccact 314

                                                                       
Query: 425 gtaattccaaagccagtaagcaacctttcccaaatccaaccctgattaacatacatattt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtaattccaaagccagtaagcaacctttcccaaatccaaccctgattaacatacatattt 254

                                                            
Query: 485 tatatctgacctctaatgctcttactataattaaaagtaccttaaacat 533
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tatatctgacctctaatgctcttactataattaaaagtaccttaaacat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)