Query= MSMg01no291_p08.b1 MSMg01no291_p08.b1 CHROMAT_FILE:
MSMg01no291_p08.b1 PHD_FILE: MSMg01no291_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:52 2005
(188 letters)
>mm_chr8_110442457_110443044
Length = 588
Score = 337 bits (174), Expect = 3e-97
Identities = 185/194 (95%), Gaps = 9/194 (4%)
Strand = Plus / Plus
Query: 1 aggtgagtgcctactgcttttctttaaatgtggtaacagttcttacatctttattcctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgagtgcctactgcttttctttaaatgtggtaacagttcttacatctttattcctaa 260
Query: 61 gcagctctctttgttagtctaccaatggcattccgaggacttggagtgtgtcgccccccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagctctctttgttagtctaccaatggcattccgaggacttggagtgtgtcgccccccc 320
Query: 121 ---------acctctgatgtatgttaggttggccctggtcttttgtgtgcatgtcttcag 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccccccccacctctgatgtatgttaggttggccctggtcttttgtgtgcatgtcttcag 380
Query: 172 ctgatctagggggc 185
||||||||||||||
Sbjct: 381 ctgatctagggggc 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_p08.g1 MSMg01no291_p08.g1 CHROMAT_FILE:
MSMg01no291_p08.g1 PHD_FILE: MSMg01no291_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:53 2005
(126 letters)
>mm_chr8_110615548_110616073
Length = 526
Score = 236 bits (122), Expect = 4e-67
Identities = 125/126 (99%)
Strand = Plus / Minus
Query: 1 aacggcaattgtgtttaggcaaaggaaattttgtggcagattatgagaatccagggaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 326 aacggcaattgtgtttaggcaaaggaaattttgtggcagattatgagaatccaggcaagg 267
Query: 61 ataagcaaactcaaatacatagataatggcttctctagctacaatgacattgacactaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ataagcaaactcaaatacatagataatggcttctctagctacaatgacattgacactaat 207
Query: 121 gttcag 126
||||||
Sbjct: 206 gttcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
