Query= MSMg01no292_o06.b1 MSMg01no292_o06.b1 CHROMAT_FILE:
MSMg01no292_o06.b1 PHD_FILE: MSMg01no292_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:05 2005
(320 letters)
>mm_chr8_92478363_92479082
Length = 720
Score = 540 bits (279), Expect = e-158
Identities = 304/313 (97%), Gaps = 2/313 (0%)
Strand = Plus / Plus
Query: 5 gaattctaatgcttctcagtgggtcacctgactctaattggtatttctaaatcctttctt 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaatgtttctcagtgggtcacctgactctaattggtatttctaaatcctttctt 264
Query: 65 gatagcatatctttcttaacgaatttctgtgatccaattactccagtaatccagatacct 124
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatagcatatctttcttaacaaagttctgtgatccaattactccagtaatccagatacct 324
Query: 125 cagaaggcaaattgggaattttgtttctaaactctttagttagtaacagaacaaaatgct 184
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 cagaaggcatattgggaattctgtttctaaactctttagttagtaacagaacaaaacgct 384
Query: 185 ttcttctaagaaaggagcattttagattgatatatgaaaatattaactagaaaaggtttt 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcttctaagaaaggagcactttagattgatatatgaaaatattaactagaaaaggtttt 444
Query: 245 gagtacagacaaaactagacataaggagcaatccactctcaagaaagaaaaaaatagatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagtacagacaaaactagacataaggagcaatccactctcaagaaagaaaaaaatagatt 504
Query: 305 tttttttaaaaaa 317
||||| ||||||
Sbjct: 505 ttttt--aaaaaa 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_o06.g1 MSMg01no292_o06.g1 CHROMAT_FILE:
MSMg01no292_o06.g1 PHD_FILE: MSMg01no292_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:05 2005
(294 letters)
>mm_chr8_92630558_92631251
Length = 694
Score = 569 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Minus
Query: 1 tgtaaggtgggcgttttgcttgagcacttcccactgagacacaatgaagcaggagagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtaaggtgggcgttttgcttgagcacttcccactgagacacaatgaagcaggagagtcc 242
Query: 61 acacagtgcttggacatcggaattttccagacgagccaggaggagaattcatgaaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacagtgcttggacatcggaattttccagacgagccaggaggagaattcatgaaagaag 182
Query: 121 agaagaggagggggaaatgatgagactcctttcttttccttgtttcccattggccaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaagaggagggggaaatgatgagactcctttcttttccttgtttcccattggccaatat 122
Query: 181 tcaccccattacaaaatgtcttggtctttcatccacttctgctggacctcatctgtcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaccccattacaaaatgtcttggtctttcatccacttctgctggacctcatctgtcctc 62
Query: 241 agggtctgaaggccatactgctgttctgtgctcagtgtgggatagccttttcag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agggtctgaaggccatactgctgttctgtgctcagtgtgggatagccttttcag 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
