Query= MSMg01no293_l18.b1 MSMg01no293_l18.b1 CHROMAT_FILE:
MSMg01no293_l18.b1 PHD_FILE: MSMg01no293_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:14 2005
(235 letters)
>mm_chr8_11099225_11099859
Length = 635
Score = 416 bits (215), Expect = e-121
Identities = 232/243 (95%), Gaps = 9/243 (3%)
Strand = Plus / Plus
Query: 1 aagcccacatttgccagccgggtgctccaacaggactagaaattattgagtttatcaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcccacatttgccagccgggtgctccaacaggactagaaattattgagtttatcaagt 260
Query: 61 gtgatttcagactgcgtaacatgctttgatgggctctcatgggtgctacagcaagccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgatttcagactgcgtaacatgctttgatgggctctcatgggtgctacagcaagccagg 320
Query: 121 catgctgtaggctccgtgatctcacagaaaagttatcttttttttccctcagcacttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgctgtaggctccgtgatctcacagaaaagttatcttttttttccctcagcacttgat 380
Query: 181 catttactgtgctttctttgagctcccagcat---------cagcctcctgtgagtgtat 231
|||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 381 catttactgtgctttcaatgagctcccagcatgccgagcatcagcctcctgtgagtgtat 440
Query: 232 ccg 234
|||
Sbjct: 441 ccg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no293_l18.g1 MSMg01no293_l18.g1 CHROMAT_FILE:
MSMg01no293_l18.g1 PHD_FILE: MSMg01no293_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:14 2005
(170 letters)
>mm_chr8_11277614_11278183
Length = 570
Score = 296 bits (153), Expect = 5e-85
Identities = 163/167 (97%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 1 aaaattatgcaacagtcatgcctttggccaaactctctggctaatgcacccatctctagc 60
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 aaaattatgcaacagccatgcctttggccaaactctctggctaaggcacccatctctagc 242
Query: 61 aggatgtgatgggtaggaggggccttaagccagcagtcctctgtgtgtgtgtgtgtgtgt 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 aggatgtgatgggtaggaggggccttaagccagcagtcctc--tgtgtgtgtgtgtgtgt 184
Query: 121 gtgtgtgtgtgtgtgtgtgtgtgtgtctttgaggagggaggagaatg 167
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtgtgtgtgtgtgtgtgtgtgtgtgtctttgaggagggaggagaatg 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
