Query= MSMg01no294_c18.b1 MSMg01no294_c18.b1 CHROMAT_FILE:
MSMg01no294_c18.b1 PHD_FILE: MSMg01no294_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:47 2005
(321 letters)
>mm_chr8_8942730_8943450
Length = 721
Score = 559 bits (289), Expect = e-164
Identities = 307/313 (98%)
Strand = Plus / Minus
Query: 5 gaattctgttccccgcctctaatcttcccttattggtttgttcagaagaacaaagaaatg 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 517 gaattctgttccccgcctctaatcttcccttattgttttgttcagaagaacaaagaaatg 458
Query: 65 atagctgggctgtctcaaaggttgacacagttaatcgtctacctttgtgcttttcctcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atagctgggctgtctcaaaggttgacacagttaatcgtctacctttgtgcttttcctcaa 398
Query: 125 caagactgaaactctgttcccggatgagggatcactgagggaagagcccactttccccag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caagactgaaactctgttcccggatgagggatcactgagggaagagcccactttccccag 338
Query: 185 ctgagctggcattaccccaagtacagctgttgggcccttggacacacagcagggaagacc 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 337 ctgagcgggcattaccccaagtacagctgttgggcccttggacacacagcaggaaagacc 278
Query: 245 taccttgctggattcatgtacccaagcacttagtactttattctatagcaggtccaatgt 304
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 277 taccttgctggattcatgtacacaagcacttagtactttattctatagcaggtccaatgg 218
Query: 305 gggagatacactg 317
|||||||| ||||
Sbjct: 217 gggagataaactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_c18.g1 MSMg01no294_c18.g1 CHROMAT_FILE:
MSMg01no294_c18.g1 PHD_FILE: MSMg01no294_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:47 2005
(302 letters)
>mm_chr8_8785083_8785784
Length = 702
Score = 507 bits (262), Expect = e-148
Identities = 292/304 (96%), Gaps = 4/304 (1%)
Strand = Plus / Plus
Query: 1 cacatgaaaaataaaaatcatttctttcttt----tttatttataaattataaaacccag 56
||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 197 cacatgaaaaataaaaatcatttctttttttttaatttatttataaactataaaacccag 256
Query: 57 ggcaaatggtttctattagcttcatggccattttctcatagtgagaacaacatgaaagca 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggcaaatggtttctattagcttcatggccattttctcatagtgagaacaacatgaaagca 316
Query: 117 tgattgtttacgtgggcagttgtaagcagaaaagataaacattaacccaaagagaacgga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 317 cgattgtttacgtgggcagttgtaagcagaaaagataaacattaacccaaagaggacgga 376
Query: 177 aggatagctcggctgtcctgtggttaaacactggaaggttttagaatctctaagcatatt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggatagctcggctgtcctgtggttaaacactggaaggttttagaatctctaagcatatt 436
Query: 237 taatttctgaatgcaggatcaaaactagttcaggaagaatagagccttcctatgatattt 296
|||||||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 437 taatttctaaatgtaggatcaaaactagctcaggaagaatagagccttcctatgatagtt 496
Query: 297 ttgc 300
||||
Sbjct: 497 ttgc 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
