Query= MSMg01no294_e15.b1 MSMg01no294_e15.b1 CHROMAT_FILE:
MSMg01no294_e15.b1 PHD_FILE: MSMg01no294_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:56 2005
(318 letters)
>mm_chr8_63578482_63579202
Length = 721
Score = 526 bits (272), Expect = e-154
Identities = 305/318 (95%), Gaps = 5/318 (1%)
Strand = Plus / Minus
Query: 5 gaattccagggcctacaagtgggagtgggtgggcaggggagtggcaggggagggtctggg 64
|||||||||| || | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 650 gaattccaggtccaagaagtgggagtgggtgggcaggggagtggcaggggagtgtctggg 591
Query: 65 ggccttttttgatcccatttgaaatgtaaatgaagaaaatacctaattaaaaaaataaat 124
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggccttttgggatagcatttgaaatgtaaatgaagaaaatacctaattaaaaaaataaat 531
Query: 125 taaaaaaaatcaaaaacaggaagaaaaaaaaaagccacagttgctaaaagtataaaaata 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 530 taaaaaaaatcaaaaacaggaag-aaaaaaaaagccacagttgctaaaagtataaaaata 472
Query: 185 gtgagcctaattcgaggtaattacttaaacatatacacaaattttgatgataa----gaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 471 gtgagcctaattcgaggtaattacttaaacatatacacaaattttgatgataaaaaagaa 412
Query: 241 aaactttcagtatcaaatgcaacttagctaattaaaatcattataatataccttccacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaactttcagtatcaaatgcaacttagctaattaaaatcattataatataccttccacat 352
Query: 301 ttccttctgacatttgtg 318
||||||||||||||||||
Sbjct: 351 ttccttctgacatttgtg 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 721
Length adjustment: 9
Effective length of query: 309
Effective length of database: 712
Effective search space: 220008
Effective search space used: 220008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_e15.g1 MSMg01no294_e15.g1 CHROMAT_FILE:
MSMg01no294_e15.g1 PHD_FILE: MSMg01no294_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:56 2005
(290 letters)
>mm_chr8_63413093_63413782
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%)
Strand = Plus / Plus
Query: 1 cagagccacaggcatatggagcaaatactttcaccaaagaaactgtaagccaggcaaaac 60
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 201 cagagccacaggcatatggagcaaatactttcaccaaagaaactgcaagaaaggcaaaac 260
Query: 61 tcaaagcccaaaagatgtacatgatgtagttcatgatataagatccagggccctaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaagcccaaaagatgtacatgatgtagttcatgatataagatccagggccctaaaaag 320
Query: 121 caaaacagctcatagtgtgaacatgctctacagcgcagcacgaattcaagcagctggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaacagctcatagtgtgaacatgctctacagcgcagcacgaattcaagcagctggcac 380
Query: 181 ataaggaacggatggagaacttaccagtactgctctttgtacttgcagggttccattcag 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ataaggaacggatggagaacttaccagtactgctctttgtacctgcagggttccattcag 440
Query: 241 atatgctgtccagactgagttcaaacttctaagctcaaaacatcctctta 290
||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 atatgctgtccagactgagttcacacttctaagctcaaaacatcctctta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
