Query= MSMg01no296_b14.b1 MSMg01no296_b14.b1 CHROMAT_FILE:
MSMg01no296_b14.b1 PHD_FILE: MSMg01no296_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:12 2005
(629 letters)
>mm_chr8_31690884_31691912
Length = 1029
Score = 1193 bits (617), Expect = 0.0
Identities = 623/625 (99%)
Strand = Plus / Minus
Query: 5 gaattcctctgtgccgtctactttagtccctgcttccaggtcactgccttgagttcctgt 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 gaattcctctgtggtgtctactttagtccctgcttccaggtcactgccttgagttcctgt 939
Query: 65 cctgacttccctcagctgctacctggaaatgtaggatgaaataaatcctttcctctgaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 cctgacttccctcagctgctacctggaaatgtaggatgaaataaatcctttcctctgaag 879
Query: 125 ttactttcagacagtttttctcatggcaacagagaagcaagttaggacaggatgaaggat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ttactttcagacagtttttctcatggcaacagagaagcaagttaggacaggatgaaggat 819
Query: 185 acataggtataaaaaggttgccatacaaggtagaggaatatggtggtggagtgtctgctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 acataggtataaaaaggttgccatacaaggtagaggaatatggtggtggagtgtctgctg 759
Query: 245 agcccgagaccatgatttttctctgacactgtatttatagagttgtgaatcatttcttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 agcccgagaccatgatttttctctgacactgtatttatagagttgtgaatcatttcttca 699
Query: 305 gtttactgaagtaaatttggattgaattttgaaagaatttgtgaaaatgcacagtagtca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gtttactgaagtaaatttggattgaattttgaaagaatttgtgaaaatgcacagtagtca 639
Query: 365 tttggaaaaacatgacaggagcttgtgaacaatatcagattggcaaccaggacacaagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tttggaaaaacatgacaggagcttgtgaacaatatcagattggcaaccaggacacaagaa 579
Query: 425 tggggagctccagagatccatgatggaatagtctccaaagtgggggttagcgttaagaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tggggagctccagagatccatgatggaatagtctccaaagtgggggttagcgttaagaaa 519
Query: 485 taaatggacttggatgctaagccttgagaatttcattttgaagctaaaagaaggggaaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 taaatggacttggatgctaagccttgagaatttcattttgaagctaaaagaaggggaaaa 459
Query: 545 atacttgttggaaaccaataaacaaacagcagatgctgtgtgttggcattccatatggct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atacttgttggaaaccaataaacaaacagcagatgctgtgtgttggcattccatatggct 399
Query: 605 tactgtggaagagtctgtcatcagg 629
|||||||||||||||||||||||||
Sbjct: 398 tactgtggaagagtctgtcatcagg 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_b14.g1 MSMg01no296_b14.g1 CHROMAT_FILE:
MSMg01no296_b14.g1 PHD_FILE: MSMg01no296_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:12 2005
(285 letters)
>mm_chr8_31552400_31553084
Length = 685
Score = 513 bits (265), Expect = e-150
Identities = 279/285 (97%), Gaps = 3/285 (1%)
Strand = Plus / Plus
Query: 1 tctcatctgaattccagcatgccttttggcttggacaacatcagagtacctctttcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcatctgaattccagcatgccttttggcttggacaacatcagagtacctctttcagtt 260
Query: 61 gaaatagagctggtagctgtgtttctccagtgaagagctggaaaaacaaatacataaata 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 gaaatagagctggtagctgtgtttctccagtgaagagctggaaaaataaatacataaata 320
Query: 121 tataaatacataaataatcaaataagtaagtgaataaataaataaaaactgtgatcatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 tataaatacataaataatcaaataagtaagtgaataaataaataaaaactgtgat---at 377
Query: 181 aatgatggacatttggctagcattgttagtttagattattgcctttctatttctgcatca 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 378 aatgatggacatttggctagcattattagtttagattattgcctttctatttctgcatca 437
Query: 241 agaattttattgaaagatttgactagatatttttgagtttttgtt 285
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 438 agaattttattgaaagttttgactagatatttttgagtttttgtt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
