Query= MSMg01no296_d13.b1 MSMg01no296_d13.b1 CHROMAT_FILE:
MSMg01no296_d13.b1 PHD_FILE: MSMg01no296_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:21 2005
(312 letters)
>mm_chr8_124882819_124883534
Length = 716
Score = 584 bits (302), Expect = e-171
Identities = 308/312 (98%), Gaps = 4/312 (1%)
Strand = Plus / Minus
Query: 5 gaattctgggtcaaatctagctgtcccattggcaggagccgaggcattgaattcagtagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattctgggtcaaatctagctgtcccattggcaggagccgaggcattgaattcagtagc 457
Query: 65 tagttagggctgcccagaatctaaatagagcccagacctgccacatccaaacaatgaatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tagttagggctgcccagaatctaaatagagcccagacctgccacatccaaacaatgaatc 397
Query: 125 atctgcttcccgaaaccctggatgtgcgtagggatgtctcatctgtaccatgtgattatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atctgcttcccgaaaccctggatgtgcgtagggatgtctcatctgtaccatgtgattatc 337
Query: 185 cccgggggtctaagggtgagcaatgaaggcatccgcctgcaagtgatgcacagtctgacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cccgggggtctaagggtgagcaatgaaggcatccgcctgcaagtgatgcacagtctgacc 277
Query: 245 ----cctgcctttggtgcgagtagcacaaaacgctttgaccacacacgttttctttagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cctgcctgcctttggtgcgagtagcacaaaacgctttgaccacacacgttttctttagac 217
Query: 301 tacaaaggtgcc 312
||||||||||||
Sbjct: 216 tacaaaggtgcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 716
Length adjustment: 9
Effective length of query: 303
Effective length of database: 707
Effective search space: 214221
Effective search space used: 214221
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_d13.g1 MSMg01no296_d13.g1 CHROMAT_FILE:
MSMg01no296_d13.g1 PHD_FILE: MSMg01no296_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:21 2005
(279 letters)
>mm_chr8_124729046_124729723
Length = 678
Score = 462 bits (239), Expect = e-135
Identities = 269/279 (96%), Gaps = 1/279 (0%)
Strand = Plus / Plus
Query: 1 agtgaaggtggctggctccctgcggtgcttgtttgtctgcccaaaccaaagttctcttct 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 201 agtgaaggtggctggctccctgcggtgcttgtttg-ctgcccaaaccaaagttctcgtct 259
Query: 61 cagtagagactcagtgccacagtgatcagtcagagtcacatgatctttcctcctgggctg 120
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 260 cagtagagactcagtgccacagtgatcggtcagagtcacatgatcgctcctcctgggcag 319
Query: 121 tagcaacccagggatgaggcctcacgccctgcatcctcttcccactaccagtacagagcc 180
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 320 tagcaacccagggatgaagcctcatgccctgcatcctcttcccactaccagtacagagcc 379
Query: 181 tgggcatttgtagggccgtggtgctcggttctctggatgctctctgaaactggaagatgg 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggacatttgtagggccgtggtgctcggttctctggatgctctctgaaactggaagatgg 439
Query: 241 gatctgtactggaggctgcacagccgtggcatgtctata 279
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 gatcagtactggaggctgcacagccgtggcatgtctata 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 678
Length adjustment: 9
Effective length of query: 270
Effective length of database: 669
Effective search space: 180630
Effective search space used: 180630
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
