CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGGTGTAATTCTGATAGGTCTGCCTTTTTATGATACTTGACTTTT
TTCCTTTATTGCTTTAATATTCTTTCTTTCTTTGTTGTGTCCATTTGATT
TTTGGTTATTATGTGATAGGAGGAATATCTTTTATGTTCCAATCTATTTG
GAGTTCAGTAGGTTTCTTGTATATTTATGGGCATCTCTTTCTTTAGGTTA
AGGGAATTTTCTTCTATAATTTTGTTGAAGATATTTACTGGCCCTTTACG
TTGGGAATTGTCACTCTCTTCTATACCAATTATCCTTAGGTTTGGTCTTC
TCATTGAGTCATGGATTTTTGGATGTTTTGTGTTTGGAGAGCTTTGCATT
TTGCATTTTCTTTGACTGTTGTGTCAGTGTTTTCTCTGGTGTCTTCTGCA
CTTGAGATTCTCTCTTCAATCTCTTTTATTATATTGGTGATGCTTGCCTC
TATGACTCCTGACATCTTTCCTAATTTTTTATCTCCAGGGTTGTCTCCCT
TTGTGATTTCTTTATTGTTTCTATTTCCATTTTTATACCCTCTCTGGATT
CCTTCACTTCTTTCACCTCTTTGATTGTGTTTTCCTGCAGTTCTTTAAGG
GATTTCTATTTTTCCTCTTTAATGGCTTCTACCAGTTTACCTATGTTCTC
CTGTATTTCTTTAAGGAAATATTTATGTCCTTCTGAATGTCCTCTGTCAA
CATCATGAGAT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATCAATTGAATAGTTCATTATTGT
CTTGGAGGTATAAATTAGTGAGATAATCAATATGTAAAAAATTTAATGTA
GATTATATGTGACATTCTTAATGGTTTTACGAATAACAGTCTGAAAAAAA
AAAGTCTTTTAAATCGTTGTGTGACTCCATAGCACTGTAGCAAGGATGCA
CAAATATTTCTCCTTTGTAGGCTTTGTTTATCTGATGGATGAGAGTCTAC
CAGAGTGATCACAATTAACTCTCCTGTGGACCGATTGCTCGGCCAGAGGC
GAGTATGCTGGCAGTGCATTAATAAGAGCCTGTGTGTATTGGTGTTTGAG
AAGTCTCTCACAAAGGCAATGTTTTACTAAACATTGATGAGGGAATCTTA
TCAAGTGTTTCTTGTGAAATATTGTATTGATGTAAGGCCTCTGGATATAC
AAAAAGTTAATTCCTATCACATTTTTTTTCACATGGTTTGTTATGGGACA
TTGATATAGTTATTTCCTAGTACTGTTCAAAAATTCAGCATTAGAAAAAT
ATCTTGGTGGCATTTTCACTTTTTTTTTCAAAATCTTTCCCCTACAATTT
ACTTTGTATTTTTAACATTAAATCTTTTGTTATCTAACATCATTATGAGT
AGTTGATAATTTCGACAATGTAATTATTTGCTTTTTATGATACATCTAAG
TAACTTACTTGC

Query= MSMg01no297_h14.g1 MSMg01no297_h14.g1 CHROMAT_FILE:
MSMg01no297_h14.g1 PHD_FILE: MSMg01no297_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:56 2005
         (687 letters)



>mm_chr8_53447098_53448182
          Length = 1085

 Score = 1282 bits (663), Expect = 0.0
 Identities = 681/687 (99%), Gaps = 2/687 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catcaattgaatagttcattattgtcttggaggtataaattagtgagataatcaatatgt 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 catcaattgcatagttcattattgtcttggaggtataaattagtgagataatcaatatgt 826

                                                                       
Query: 61  aaaaaatttaatgtagattatatgtgacattcttaatggttttacgaataacagtctgaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 825 aaaaaatttaatgtagattatatgtgacattcttaatggttttacgaataacagtctg-a 767

                                                                       
Query: 121 aaaaaaaagtcttttaaatcgttgtgtgactccatagcactgtagcaaggatgcacaaat 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 766 aaaaaaaagtcttttaaatcgtcgtgtgactccatagcactgtagcaaggatgcacaaat 707

                                                                       
Query: 181 atttctcctttgtaggctttgtttatctgatggatgagagtctaccagagtgatcacaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atttctcctttgtaggctttgtttatctgatggatgagagtctaccagagtgatcacaat 647

                                                                       
Query: 241 taactctcctgtggaccgattgctcggccagaggcgagtatgctggcagtgcattaataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 taactctcctgtggaccgattgctcggccagaggcgagtatgctggcagtgcattaataa 587

                                                                       
Query: 301 gagcctgtgtgtattggtgtttgagaagtctctcacaaaggcaatgttttactaaacatt 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gagcctatgtgtattggtgtttgagaagtctctcacaaaggcaatgttttactaaacatt 527

                                                                       
Query: 361 gatgagggaatcttatcaagtgtttcttgtgaaatattgtattgatgtaaggcctctgga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gatgagggaatcttatcaagtgtttcttgtgaaatattgtattgatgtaaggcctctgga 467

                                                                       
Query: 421 tatacaaaaagttaattcctatcacattttttttcacatggtttgttatgggacattgat 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 466 tatacaaaaagttaattcctatcac-ttttttttcacatggtttgttatgggacattgat 408

                                                                       
Query: 481 atagttatttcctagtactgttcaaaaattcagcattagaaaaatatcttggtggcattt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 atagttatttcctagtactgttcaaaaattcagcattagaaaaatatcttggtggcattt 348

                                                                       
Query: 541 tcactttttttttcaaaatctttcccctacaatttactttgtatttttaacattaaatct 600
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tcacttttgttttcaaaatctttcccctacaatttactttgtatttttaacattaaatct 288

                                                                       
Query: 601 tttgttatctaacatcattatgagtagttgataatttcgacaatgtaattatttgctttt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tttgttatctaacatcattatgagtagttgataatttcgacaatgtaattatttgctttt 228

                                      
Query: 661 tatgatacatctaagtaacttacttgc 687
           |||||||||||||||||||||||||||
Sbjct: 227 tatgatacatctaagtaacttacttgc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1085
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1075
Effective search space:   727775
Effective search space used:   727775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)