Query= MSMg01no299_e24.b1 MSMg01no299_e24.b1 CHROMAT_FILE:
MSMg01no299_e24.b1 PHD_FILE: MSMg01no299_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:12 2005
(553 letters)
>mm_chr8_37126681_37127633
Length = 953
Score = 837 bits (433), Expect = 0.0
Identities = 436/437 (99%)
Strand = Plus / Minus
Query: 4 gaattctttccacctacctgataagacctggtacttcctcctcatgtatggggtgcacag 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaattctttccaccaacctgataagacctggtacttcctcctcatgtatggggtgcacag 378
Query: 64 gaaattatgataatgtagactgagttaaaagtttgtgacctatcagtttattggcaattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaaattatgataatgtagactgagttaaaagtttgtgacctatcagtttattggcaattt 318
Query: 124 aaggtggggtaaccttccatagtagttttccttcctggctctgctgtgaaagatggtttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaggtggggtaaccttccatagtagttttccttcctggctctgctgtgaaagatggtttt 258
Query: 184 gtaccatatacctacagctgcctggtaaatttgtattcatagacacctgtgccatagttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtaccatatacctacagctgcctggtaaatttgtattcatagacacctgtgccatagttt 198
Query: 244 gaataggcatggcccccatagactcctgtgtttcagtgattggcactattaggatgtatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaataggcatggcccccatagactcctgtgtttcagtgattggcactattaggatgtatg 138
Query: 304 gccttggtggaggaagtgtattactgtggaggtgggttttgaggtctcctatgctcaagc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gccttggtggaggaagtgtattactgtggaggtgggttttgaggtctcctatgctcaagc 78
Query: 364 taggcctaatgtgacagtttccttctactacctgaagatcaagatgtagaactcgcatct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 taggcctaatgtgacagtttccttctactacctgaagatcaagatgtagaactcgcatct 18
Query: 424 cctcgtccagtaccatg 440
|||||||||||||||||
Sbjct: 17 cctcgtccagtaccatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_e24.g1 MSMg01no299_e24.g1 CHROMAT_FILE:
MSMg01no299_e24.g1 PHD_FILE: MSMg01no299_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:12 2005
(471 letters)
>mm_chr8_36969260_36970130
Length = 871
Score = 880 bits (455), Expect = 0.0
Identities = 467/471 (99%), Gaps = 1/471 (0%)
Strand = Plus / Plus
Query: 1 agatgtatctctgtgagatttgaaaatgttcctcttcaagagtcaacaagagaaagagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgtatctctgtgagatttgaaaatgttcctcttcaagagtcaacaagagaaagagaa 260
Query: 61 ggtgatatggttaagaacaattgaggtgtcacagttcagcatcacatgcccttcagatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgatatggttaagaacaattgaggtgtcacagttcagcatcacatgcccttcagatct 320
Query: 121 ttattctatacttagaaaaataatgggagggactggtcactatgaaggtatgtatgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattctatacttagaaaaataatgggagggactggtcactatgaaggtatgtatgtatg 380
Query: 181 tatgtatgtatccatatattctcatggggtgtgtgctcatgtatgtatattgctatacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgtatgtatccatatattctcatggggtgtgtgctcatgtatgtatattgctatacat 440
Query: 241 gctcatatctgtattgtctgtgctcacacatgttgatgtatattatatgtgctcacatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcatatctgtattgtctgtgctcacacatgttgatgtatattatatgtgctcacatag 500
Query: 301 gtgtgtgcttgggctcatgtatatgtgaagcgtgtgtgctcctgcgcgcggatgtctgtt 360
|||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct: 501 gtgtgtgcttgggctcatgtatatgtgaagcgtgtgtgctcctgtgtgtggatgtctgtt 560
Query: 361 gtgtgtgctcatgtatgtgtatggtgtgtgtgcctgtgcaagtgtgtgtgctcatacatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgtgctcatgtatgtgtatggtgtgtgtgcctgtgcaagtgtgtgtgctcatacatg 620
Query: 421 tatgcttgtgtaagtgcctcagatatggatgtgccaaagcacaccagcagc 471
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 tatgcttgtgtaagtgc-tcagatatggatgtgccaaagcacaccagcagc 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
