Query= MSMg01no300_b23.b1 MSMg01no300_b23.b1 CHROMAT_FILE:
MSMg01no300_b23.b1 PHD_FILE: MSMg01no300_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:13 2005
(627 letters)
>mm_chr8_86114660_86115688
Length = 1029
Score = 1189 bits (615), Expect = 0.0
Identities = 624/627 (99%)
Strand = Plus / Minus
Query: 1 tcagcaggtaaaggtgtctgctattgaacctgaagacttggggttagtcccttttagttc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 656 tcagcaggtaaaggtgtctgctattgaacctgaagacttggggttagttccttttagttc 597
Query: 61 ctggaacgcaggtggtgaaaggaaagaactcccacaggctgccctctgacttccacttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ctggaacgcaggtggtgaaaggaaagaactcccacaggctgccctctgacttccacttgc 537
Query: 121 atgcatcagtgtgcatcacaggctgccctctctgacttccacatgcatgcatcagtgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atgcatcagtgtgcatcacaggctgccctctctgacttccacatgcatgcatcagtgtgc 477
Query: 181 atcacaggctgccctctctgacttccacatgcatgcatcagtgtgcatcacaggctgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atcacaggctgccctctctgacttccacatgcatgcatcagtgtgcatcacaggctgccc 417
Query: 241 tctctgacttccacatgcatgcatcagtgtgcatcacaggctgccctctctgatttccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 416 tctctgacttccacatgcatgcatcagtgtgcatcacaggctgccctctctgacttccac 357
Query: 301 atgcatgcatcagtgtgcatcacaggctgccctctctgacttccacatgcacgcatcaga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atgcatgcatcagtgtgcatcacaggctgccctctctgacttccacatgcacgcatcagt 297
Query: 361 gtgcgttcaattacaataaataaaaatgtaatttttcttgaggtagaatctgtgtagtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtgcgttcaattacaataaataaaaatgtaatttttcttgaggtagaatctgtgtagtct 237
Query: 421 gtgtagctctgcctgaccctgagtggcctggaacttgccttgtagactagtctgtatctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gtgtagctctgcctgaccctgagtggcctggaacttgccttgtagactagtctgtatctg 177
Query: 481 gccttgaaccaagggatctccctttgtcttcctaagtgctgggtttaaaggcgtgtgcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gccttgaaccaagggatctccctttgtcttcctaagtgctgggtttaaaggcgtgtgcta 117
Query: 541 ccacaacaggctaaaattttaatttaaataacaaagtaatagatacctttgaaggactga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ccacaacaggctaaaattttaatttaaataacaaagtaatagatacctttgaaggactga 57
Query: 601 gtcgatcctttgccctcttgcacctct 627
|||||||||||||||||||||||||||
Sbjct: 56 gtcgatcctttgccctcttgcacctct 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 2
Length of query: 627
Length of database: 1029
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1019
Effective search space: 628723
Effective search space used: 628723
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_b23.g1 MSMg01no300_b23.g1 CHROMAT_FILE:
MSMg01no300_b23.g1 PHD_FILE: MSMg01no300_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:13 2005
(238 letters)
>mm_chr8_85933729_85934366
Length = 638
Score = 426 bits (220), Expect = e-124
Identities = 232/240 (96%), Gaps = 8/240 (3%)
Strand = Plus / Plus
Query: 1 gttggagaggtttatcttagtatgaagaagattgggctgtacctgtaaagagggatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttggagaggtttatcttagtatgaagaagattgggctgtacctgtaaagagggatgttt 260
Query: 61 tgtggtcataagtccccaccgggtcagctagctgctgggtaattttacctgtggagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtcataagtccccaccgggtcagctagctgctgggtaattttacctgtggagataa 320
Query: 121 tggaatttttcactgttgaaaaatgagtttaaaacaaattttatctttattttagaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaatttttcactgttgaaaaatgagtttaaaacaaattttatctttattttagaaaat 380
Query: 181 attgtagctagtgatttctttta----attttgattcaaaacatgggttttttttttctg 236
|||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 381 attgtagctagtgatttc----agcaaattttgattcaaaacatgggttttttttttctg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
