Query= MSMg01no301_h18.b1 MSMg01no301_h18.b1 CHROMAT_FILE:
MSMg01no301_h18.b1 PHD_FILE: MSMg01no301_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:53 2005
(638 letters)
>mm_chr8_112117615_112118649
Length = 1035
Score = 1139 bits (589), Expect = 0.0
Identities = 622/635 (97%), Gaps = 5/635 (0%)
Strand = Plus / Plus
Query: 5 gaattccttcaccggccagtgatgcccacgactggcttgtgcagtccatcgaggccacag 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcaccggctagtgatgcccacgactggcttgtgcagtccatcgaggccacag 264
Query: 65 ttcaagggacatgctttgagacagctctccctctcaggactcagtcacgcagcttgcttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcaagggacatgctttgagacagctctccctctcaggactcagtcacgcagcttg---- 320
Query: 125 agttggtaggcgccttttgggtggggcttcaggctggtacggtcacctgcggtgatctgc 184
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 321 agttggtaggcgccttttgggtggggcttcaggctggtaccgtcacctgcggtgatctac 380
Query: 185 tccaatggcatctgtcactgtgttaaagccccgttctctggaaagagaagcagcagcctg 244
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tccaatggcgtctgtcactgtgttaaaaccccgttctctggaaagagaagcagcagcctg 440
Query: 245 ttactgcaaggagcccatgctccccatgagcacactgcttactacactgtcccacaccca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttactgcaaggagcccatgctccccatgagcacactgcttactacactgtcccacaccca 500
Query: 305 acgcgccctgggacctctactctcccctcacccaggtagctgcacaaacgtccacacagg 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 acgcgccctgggacctctactctcccctcacccaggcagctgcacaaacgtccacacagg 560
Query: 365 ccttctgtgcaggaagggaggtaactttatatcctgcagctcccagacactgagtcgatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttctgtgcaggaagggaggtaactttatatcctgcagctcccagacactgagtcgatg 620
Query: 425 taaattcattacctgctttgttctgctaggactcctccatcccc-gggacccgagaaagt 483
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 taaattcattacctgctttgttctgctaggactcctccatcccccgggacccgagaaagt 680
Query: 484 ggcaagccttgcctggtaaccaggactgcctcagactcattctgaattctctaggcattg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 ggcaagccttgcctggtaaccaggactgcctcagactcattctgaattctctaggcactg 740
Query: 544 tcggtccttggtcaaaggtgcagcaaagaaaatcttcccaccctgccatcagcgtttccc 603
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 tcggtccttggtcaaaggtgcagcaaagaaaatcttcccaccctgccatcagtgtttccc 800
Query: 604 tccagccctttgggggatgcacaacagactgacga 638
|||||||||||||||||||||||||||||||||||
Sbjct: 801 tccagccctttgggggatgcacaacagactgacga 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1035
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1025
Effective search space: 643700
Effective search space used: 643700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_h18.g1 MSMg01no301_h18.g1 CHROMAT_FILE:
MSMg01no301_h18.g1 PHD_FILE: MSMg01no301_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:53 2005
(607 letters)
>mm_chr8_112300822_112301828
Length = 1007
Score = 661 bits (342), Expect = 0.0
Identities = 395/422 (93%), Gaps = 19/422 (4%)
Strand = Plus / Minus
Query: 5 cctcctacctttcttcgggccatctgtacagggcagccctaggtacaccctaagactaga 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cctcctacctttcttcggggcatctgtacagggcagccctaggtacaccctaagactaga 421
Query: 65 agaacatcataatgctagcacagtgcagattactttgagccaggcctatgcatgaaacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agaacatcataatgctagcacagtgcagattactttgagccaggcctatgcatgaaacat 361
Query: 125 gccaaattcactgtgaaatttccataaaggaaatcttcaagcagagatgcaaggcaaagg 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 360 gccaaattcactgtgaaatttccgtaaaggaaatcttcaagcagagatgcaaggcaaagg 301
Query: 185 tagccaagttttccacatggaagattaaaatagtttttatgggccaaaattaagtgttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tagccaagttttccacatggaagattaaaatagtttttatgggccaaaattaagtgttta 241
Query: 245 ccatagcaaacaacaaaagttttatttttctcttttcttctcattctcctccttctc--- 301
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 240 ccatagcaaacaacaaaagttttatttttctcttttcttctccttctcctccttctcctt 181
Query: 302 ctcctc---ctcctcctcctcctcctcctcctcctcctcctcct--tc----------tt 346
|||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 180 ctcctccttctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctt 121
Query: 347 cttcttcttcttcaatcttctttgtcctttctctcctcctcttttcttcttctcctcctc 406
||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 120 cttcttcttcttct-tcttcttcatcctttctctcctcctcttttctcctcctcctcctc 62
Query: 407 ct 408
||
Sbjct: 61 ct 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
