CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCACTTCTGAGCCCCATTTTTTTTTCACCATTAAAACCCCC
CCAAAAAAAACCACATTTTTTTTCATTTAAAAAAGTTTTAGGTCACATAA
AACAAGGCAACATTTACTCCTTCTTCTCGTCTTCTGGCACTGGGTCTGTG
GGCGGCTCCTCCACTGTGGCGCTGTTGCTCTCTGAGCCCATGTTACTGTC
ACTGGTCCCTTTCACCTCCATGCTGTCAACCTCCTCCTGCCCACTCTCCT
TGTCCTCTGGAGTAGACGTGCCTTCTTCACCATTCTGCTGGCTCTCTGCT
GTGTCTTCAAGGTGTGTCTCCTCTGTCTCCATTGGGATGCTCTCCTCATC
CTTCTTCTCCTCGGCTTTGTTCGCCACTTGCTCTTCCTCGGGGGCGATGC
TGCTCTGAGTGCGCTCAGCCTGCTCTGCTGCCTCCTTCTCCCTCTCCTCC
TGCCTCTTTCGGGCCTGTTCCTCTGCCTGAGCGATCTCAGCCGCAATCTT
CTCCATGTCTACTTCCACCTTCAGACCACATAACCTTTTAAGTTCATTGT
TAAAGGAGTCCGTGCTTTCCAGGAATTTCCTCTTCTTTTCCTGGTGTCGT
TCCTCTATCTGAAGGAGCTCAGCTTCTAGTTTCCGCTGATGAACCATTAA
AGACTGGACCTGTCGCTTGAGA

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTCGTCATGGACCAAAAGATGTCTC
TGCCTTTTGTAAGGATATTGATGTGGTAAGAATCCCAAAAAGACCCCTGA
CTTTCATGCACTCCCAGCAACTGCAGAGGAAATTGCAGAGAACTGGAGTT
TCATCCACCAGTGAACTCACTATACTACCCAGAACAATGCTGTTGATGAG
ATTCACAGAGGAATTCCTGATCAATGCACAAAATAAAAGAGGCTTTATGG
CTCAAAACAGAGCTATCCTGGGGACCAATTCAAGGGAGAGTTTCCAGCAA
ATAGGCCAGCAAAAATAAATGCAAAAGAAAAAAATCAGAACGAAACAGAA
CAGAAACACACTTAACTCACATGGAGAGGGGGAAAGCTAGGCAAAGACGC
AGCAAAAGGAAACTGCAAGCATCTCAGTACTGAACTGATGATGCTGCTGA
ACTGGGAGGAGCTTGTGAACACTGCCGAGCACAATGGATGCTGGCACAGT
TCATAGACACAAGCATGAGAAGAGGTTTGAAAACGAGACAATTTTACCTT
TCAGCCTACAGTGATTTTTCTAGCTTAAAAAATCTCACCACCATGCCCAG
TACTTCCTTTCAACTGCATATTTAGAATTCTACTTCTATGAGGAAGAAGC
AAATGTAAAAAAAAAAAATATTN

Query= MSMg01no301_j18.g1 MSMg01no301_j18.g1 CHROMAT_FILE:
MSMg01no301_j18.g1 PHD_FILE: MSMg01no301_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:03 2005
         (618 letters)



>mm_chr8_42827930_42828947
          Length = 1018

 Score = 1195 bits (618), Expect = 0.0
 Identities = 618/618 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcgtcatggaccaaaagatgtctctgccttttgtaaggatattgatgtggtaagaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 tttcgtcatggaccaaaagatgtctctgccttttgtaaggatattgatgtggtaagaatc 759

                                                                       
Query: 61  ccaaaaagacccctgactttcatgcactcccagcaactgcagaggaaattgcagagaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ccaaaaagacccctgactttcatgcactcccagcaactgcagaggaaattgcagagaact 699

                                                                       
Query: 121 ggagtttcatccaccagtgaactcactatactacccagaacaatgctgttgatgagattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ggagtttcatccaccagtgaactcactatactacccagaacaatgctgttgatgagattc 639

                                                                       
Query: 181 acagaggaattcctgatcaatgcacaaaataaaagaggctttatggctcaaaacagagct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 acagaggaattcctgatcaatgcacaaaataaaagaggctttatggctcaaaacagagct 579

                                                                       
Query: 241 atcctggggaccaattcaagggagagtttccagcaaataggccagcaaaaataaatgcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 atcctggggaccaattcaagggagagtttccagcaaataggccagcaaaaataaatgcaa 519

                                                                       
Query: 301 aagaaaaaaatcagaacgaaacagaacagaaacacacttaactcacatggagagggggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aagaaaaaaatcagaacgaaacagaacagaaacacacttaactcacatggagagggggaa 459

                                                                       
Query: 361 agctaggcaaagacgcagcaaaaggaaactgcaagcatctcagtactgaactgatgatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agctaggcaaagacgcagcaaaaggaaactgcaagcatctcagtactgaactgatgatgc 399

                                                                       
Query: 421 tgctgaactgggaggagcttgtgaacactgccgagcacaatggatgctggcacagttcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgctgaactgggaggagcttgtgaacactgccgagcacaatggatgctggcacagttcat 339

                                                                       
Query: 481 agacacaagcatgagaagaggtttgaaaacgagacaattttacctttcagcctacagtga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agacacaagcatgagaagaggtttgaaaacgagacaattttacctttcagcctacagtga 279

                                                                       
Query: 541 tttttctagcttaaaaaatctcaccaccatgcccagtacttcctttcaactgcatattta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tttttctagcttaaaaaatctcaccaccatgcccagtacttcctttcaactgcatattta 219

                             
Query: 601 gaattctacttctatgag 618
           ||||||||||||||||||
Sbjct: 218 gaattctacttctatgag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)