Query= MSMg01no305_k07.b1 MSMg01no305_k07.b1 CHROMAT_FILE:
MSMg01no305_k07.b1 PHD_FILE: MSMg01no305_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:50 2005
(422 letters)
>mm_chr8_115291072_115291894
Length = 823
Score = 764 bits (395), Expect = 0.0
Identities = 404/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Minus
Query: 15 ggaatt-attttaggtcacaatttgtcattttgatccactcgacattttcatgtttaaag 73
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaattcattttaggtcacaatttgtcattttgatccactcgacattttcatgtttaaag 562
Query: 74 agagttgaaaattagtcccgagggttagcactgcttaaagcatgtgagagatcgtctcta 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agagttgaaaattagtcccgagggttagcactgcttaaagcatgtgagagatcgtctcta 502
Query: 134 agacacagaagtgggaacacaaataggatccaatggaccacatcatgtgactcgtttgct 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacacagaagtgggaacacaaataggatccaatggaccacatcatgtgactcgtttgct 442
Query: 194 tacctccaaaataaaagacacctcctgaattaacctgctcgggccccagccaaggagaag 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacctccaaaataaaagacacctcctgaattaacctgctcgggccccagccaaggagaag 382
Query: 254 cagggctgatgtggccgtccaccaccacactcaggtgattccttttagcagacaaggaga 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggctgatgtggccgtccaccaccacactcaggtgattccttttagcagacaaggaga 322
Query: 314 cagaatgccactggccgtcacctaagcctgcacctggggagaggagacagaggaagattt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 cagaatgccactggccgtcacctaagcctgcacctggggagaggagacagaggaagagct 262
Query: 374 ctcaatagaaaacacgaagcagccacttatgaacagcacagacacta 420
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaatagaaaacacgaagcagccacttatgaacagcacagacacta 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 823
Length adjustment: 9
Effective length of query: 413
Effective length of database: 814
Effective search space: 336182
Effective search space used: 336182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_k07.g1 MSMg01no305_k07.g1 CHROMAT_FILE:
MSMg01no305_k07.g1 PHD_FILE: MSMg01no305_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:50 2005
(328 letters)
>mm_chr8_115117086_115117813
Length = 728
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%)
Strand = Plus / Plus
Query: 1 ttccccatctttgggcagtatgatgttttcttgctttccactgatttctaatttatttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccccatctttgggcagtatgatgttttcttgctttccactgatttctaatttatttat 260
Query: 61 cttagttattaaagacgggatgttcccttagcccacaatgtggagttcctatagttcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttagttattaaagacgggatgttcccttagcccacaatgtggagttcctatagttcagt 320
Query: 121 tgtcgatagcttctaggccaacatatttaatgtttcagtgttcacaccaatgtgcacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtcgatagcttctaggccaacatatttaatgtttcagtgttcacaccaatgtgcacagg 380
Query: 181 taaaatggggtgggaaagaaacaagcgtcaacctgcattttaaagttttattcttattag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatggggtgggaaagaaacaagcgtcaacctgcattttaaagttttattcttattag 440
Query: 241 ttttagttatgtgtctgtatgaatatctatgtgcatgtggcggccgggggcgttagagtc 300
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 ttttagttatgtgtctgtacgaatatctatgtgcatgtggcggccggggtcgttagagtc 500
Query: 301 ttctgaagctggaggtacaggtggttg 327
|||||||||||||||||||||||||||
Sbjct: 501 ttctgaagctggaggtacaggtggttg 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
