NATATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATCTAATCTTCACTCCTATGGAGAAGAAAGGAACTTCCTT
CCCCGCATTAGTAAGCCTTAGGCATTATCTCCGTCTTAATCAAGGTCCTG
CTTTTGAAGTGAAATTTAGCCATCCAGTGTGAATGACAACTCCAATGTCT
CAGCACTACCTCTATGGGAATCTGTATTCTTGGCCTTTAAAAGAATCCAG
TAACTGATATCTCCAACTCCAGTAGCTCCTGGAATAAAATAAAGTGGGCA
TTATGTCACTGATGGACCATACCTAGCCAGGAAGCAACAGTGCCAGAAGC
CAAAGACTGATGCTAAGAAACATTTCATGCTACACAGGTGCTGGGATAGA
AGACTTTTGTGTGACTTGCGGGGTTTGCAAATTGCCTTCCAGGGTTCTTT
GGTTTTAATTCTTTCCCTAGTCCTGTGAGATGGAAGCAGTTGTATGCTAT
CTCACAGAACAGAGCTCGATGTAGAATCACCAAGTAAGGGGCTCACAGCC
GTGAAGCCAGCACTGACAGCCCCAGGACCTGCTTCCAGAAACACAGGTTC
TGGGGTTCATACTCTCCCCCAACAACAACACAGAACCTTTGAGAAGGGCC
TTTCAGTCTTCTATCTTATCTACCTGTTCAAAGAAATATGAATTCAGTAA
GTATGCTTGCAAGCAAATACATTCCAGCTTCATTTTCCTCCTTCATGTCT

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTACAACAGCTTTTTTTTTCAAT
TCTTAGCATGTAAATTTTGTTACATAAAATTTTTGCATAGCATGTTTAGG
GAACTGAAGTTGGCTATCAAATTAAAGTAGATTTGGGTATAAAAATAATT
TCTTAGCCTAATGAAAATTCTAAAAGAATGAATAATTACAATAAAATTTT
ACATTTTTAACATTTTCTCTATATGATATGAATTAGAGATTTTAATTTAA
GGGTTTAAATGTTTTAGGTGCATTTTGAAAATATTTCTAGTGAGGAATTT
CATACAGAGTTAAATTTATTTTTTTTTCCCCCGCCCCCTCTAGCATTTTA
GTAATGTGTATGCATTTATCTAAGGTAACACTACTATAGGAATAAGAAGC
AAGATAGTCATCAGTTTATTTTGTCATTTGCAAGACTGCACTTTCTCTAC
CAGACAGCATGTAACTTGAAGGTTACTGTCATCGTTTGACCACTCAATGT
GTGAATATTTCTGTGTGTATGAAGCTAACGTATACAAACATGGCATAACT
TCTGGTCTCGAAGAGCCAGGCAGGGCTCACAGGAGTTCAAACAGGTTTTG
TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGTTTGTTTGTTTGTTT
GTTTTATGGAATGATGCTAAGAGCTCAGATAAGATTTCCATCTAAAAC

Query= MSMg01no306_k24.b1 MSMg01no306_k24.b1 CHROMAT_FILE:
MSMg01no306_k24.b1 PHD_FILE: MSMg01no306_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:33 2005
         (618 letters)



>mm_chr8_16905733_16906750
          Length = 1018

 Score = 1187 bits (614), Expect = 0.0
 Identities = 617/618 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtcttaatcaaggtcctgcttttgaagtgaaatttagccatccagtgtgaatgacaactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gtcttaatcaaggtcctgcttttgaagtgaaatttagccatccagtgtgaatgacaactc 759

                                                                       
Query: 61  caatgtctcagcactacctctatgggaatctgtattcttggcctttaaaagaatccagta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 caatgtctcagcactacctctatgggaatctgtattcttggcctttaaaagaatccagta 699

                                                                       
Query: 121 actgatatctccaactccagtagctcctggaataaaataaagtgggcattatgtcactga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 actgatatctccaactccagtagctcctggaataaaataaagtgggcattatgtcactga 639

                                                                       
Query: 181 tggaccatacctagccaggaagcaacagtgccagaagccaaagactgatgctaagaaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tggaccatacctagccaggaagcaacagtgccagaagccaaagactgatgctaagaaaca 579

                                                                       
Query: 241 tttcatgctacacaggtgctgggatagaagacttttgtgtgacttgcggggtttgcaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tttcatgctacacaggtgctgggatagaagacttttgtgtgacttgcggggtttgcaaat 519

                                                                       
Query: 301 tgccttccagggttctttggttttaattctttccctagtcctgtgagatggaagcagttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgccttccagggttctttggttttaattctttccctagtcctgtgagatggaagcagttg 459

                                                                       
Query: 361 tatgctatctcacagaacagagctcgatgtagaatcaccaagtaaggggctcacagccgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tatgctatctcacagaacagagctcgatgtagaatcaccaagtaaggggctcacagccgt 399

                                                                       
Query: 421 gaagccagcactgacagccccaggacctgcttccagaaacacaggttctggggttcatac 480
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 398 gaagccagcactgacagccccaggacctgcttccagaaacactggttctggggttcatac 339

                                                                       
Query: 481 tctcccccaacaacaacacagaacctttgagaagggcctttcagtcttctatcttatcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctcccccaacaacaacacagaacctttgagaagggcctttcagtcttctatcttatcta 279

                                                                       
Query: 541 cctgttcaaagaaatatgaattcagtaagtatgcttgcaagcaaatacattccagcttca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cctgttcaaagaaatatgaattcagtaagtatgcttgcaagcaaatacattccagcttca 219

                             
Query: 601 ttttcctccttcatgtct 618
           ||||||||||||||||||
Sbjct: 218 ttttcctccttcatgtct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)