Query= MSMg01no307_h09.b1 MSMg01no307_h09.b1 CHROMAT_FILE:
MSMg01no307_h09.b1 PHD_FILE: MSMg01no307_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:31 2005
(234 letters)
>mm_chr8_121585597_121586230
Length = 634
Score = 408 bits (211), Expect = e-118
Identities = 226/233 (96%), Gaps = 4/233 (1%)
Strand = Plus / Plus
Query: 1 tgaggcttccctctctactgcagagtagacaatgcctcccacaatgcacctcgatgtccc 60
||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgaggct----tctctgccgcagagtagacaatgcctcccacaatgcacctcgatgtccc 260
Query: 61 gtgccacggtctactaaaagcaggtagtttctacttctgcaaggctgacagcagcagcct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 gtgccacggtctactaaaagcaggtagtttctacttctgcaaggctgacagcggcagcct 320
Query: 121 gggattgaagggatagatgaagctacgttaaggctttgctgcccccaccccagggattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggattgaagggatagatgaagctacgttaaggctttgctgcccccaccccagggattct 380
Query: 181 ttttcttttgtttgttttaaggtccgaggcattttttatttcttattctgtta 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttcttttgtttgttttaaggtccgaggcattttttatttcttattctgtta 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no307_h09.g1 MSMg01no307_h09.g1 CHROMAT_FILE:
MSMg01no307_h09.g1 PHD_FILE: MSMg01no307_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:31 2005
(243 letters)
>mm_chr8_121737116_121737758
Length = 643
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Minus
Query: 1 tttaaggtctctgggctttcaggaatcatggggtgagggtggttgtacgctccatgccca 60
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 554 tttaaggtctctgggctttcaggaatcatggggtgagggtggttttaggctccatgccca 495
Query: 61 ccatcccagcacttgataagctgaggcaggaggattggcatgagttctaggcaaccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccatcccagcacttgataagctgaggcaggaggattggcatgagttctaggcaaccacca 435
Query: 121 cccactgacgcttgctctgcagcacgcagtaggtggtatgctctatctcctcaccgccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cccactgacgcttgctctgcagcacgcagtaggtggtatgctctatctcctcaccgccgc 375
Query: 181 ccagtgaaatcaacagtattctctgtggcacatgaaagtgaagagccggacaaagacagg 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 374 ccagtgaaatcaacagtattctctgtggcacatgaaagtgaagagctggacaaagacagg 315
Query: 241 ga 242
||
Sbjct: 314 ga 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
