Query= MSMg01no307_k16.b1 MSMg01no307_k16.b1 CHROMAT_FILE:
MSMg01no307_k16.b1 PHD_FILE: MSMg01no307_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:47 2005
(685 letters)
>mm_chr8_59131682_59132767
Length = 1086
Score = 1309 bits (677), Expect = 0.0
Identities = 683/685 (99%), Gaps = 1/685 (0%)
Strand = Plus / Plus
Query: 1 cagaatacctaataactgacactttagaagataaatttgaagtatcacatggcttccagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 cagaatacctaataactgacactttagaagataaatttgaagtatcacatggcttctagg 260
Query: 61 caggaagcattgaagtagcaagtgtcttaggtgaggggaagctgggcctgagcgtgcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaagcattgaagtagcaagtgtcttaggtgaggggaagctgggcctgagcgtgcagc 320
Query: 121 actgacagttactgtctgccccaaggcatttcgtaattgttccatgagagtctgagataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgacagttactgtctgccccaaggcatttcgtaattgttccatgagagtctgagataa 380
Query: 181 aaaagcatcatgggatctttcataggttcaccattgtgcacagtcaaactcaaattgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagcatcatgggatctttcataggttcaccattgtgcacagtcaaactcaaattgtct 440
Query: 241 cagtgtaggaaggacctgaggcctgggaaaagttgagccttatatgcaagcatgtaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtgtaggaaggacctgaggcctgggaaaagttgagccttatatgcaagcatgtaaagt 500
Query: 301 tgcagctttgaaaaactaggctgtttgataaataatctcagtgtgcttccaaacaccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcagctttgaaaaactaggctgtttgataaataatctcagtgtgcttccaaacaccttc 560
Query: 361 tgcagactttgaattgcacttgtgactttcccatcagtctcctcaatcatctctattagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcagactttgaattgcacttgtgactttcccatcagtctcctcaatcatctctattagc 620
Query: 421 attatcacgagctctgtttgtttttccttctaggcagtttatctttgtctgttcccagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attatcacgagctctgtttgtttttccttctaggcagtttatctttgtctgttcccagga 680
Query: 481 ctctagagacacaaagaagtgaacacatggtatgcagcatgtttatttgctaactaatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctagagacacaaagaagtgaacacatggtatgcagcatgtttatttgctaactaatgc 740
Query: 541 gtgggttgcttcatgtgatgctctggattgccatccctctgttgactagagtaggcacga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgggttgcttcatgtgatgctctggattgccatccctctgttgactagagtaggcacga 800
Query: 601 taatgccttataaccagaatagaaacattcaagctcatctttccttcttcttaa-cacaa 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 801 taatgccttataaccagaatagaaacattcaagctcatctttccttcttcttaaacacaa 860
Query: 660 gggtttgatatcgacaggatgctga 684
|||||||||||||||||||||||||
Sbjct: 861 gggtttgatatcgacaggatgctga 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1086
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1076
Effective search space: 726300
Effective search space used: 726300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_k16.g1 MSMg01no307_k16.g1 CHROMAT_FILE:
MSMg01no307_k16.g1 PHD_FILE: MSMg01no307_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:47 2005
(676 letters)
>mm_chr13_16404911_16405986
Length = 1076
Score = 1276 bits (660), Expect = 0.0
Identities = 672/676 (99%)
Strand = Plus / Plus
Query: 1 tatgatccgaaatcaaattttagatggtgtacttaatttccttgtatttggcagctatag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tatgatccgaaatcaaattttagatgatgtacttaatttccttgtatttggcagctatag 260
Query: 61 aacattcactttattgccatataaatgacatatagtttattctacatggccaaatgtcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacattcactttattgccatataaatgacatatagtttattctacatggccaaatgtcta 320
Query: 121 caggcagttaattggttttacagagctgttaaaataaatcagaagttcaaaatgctggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggcagttaattggttttacagagctgttaaaataaatcagaagttcaaaatgctggaa 380
Query: 181 aggtggctcatcatttaggagcacttgttgctcttcaagaggaccaggattcaattccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtggctcatcatttaggagcacttgttgctcttcaagaggaccaggattcaattccca 440
Query: 241 gcacccacatgaaagatcacaaccatctgtgactcaggtaccaggagatctcataccccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacccacatgaaagatcacaaccatctgtgactcaggtaccaggagatctcataccccc 500
Query: 301 ttctgttctgagtgacattgtgcacagacatataatcagacaagacaaccatacacaaaa 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ttctgttctgagtgacattgtgcacagacatataatcagacaagataaccatacacaaaa 560
Query: 361 ttaaattatttaaaaatctgaaattcaagattttaactgagttgttctggtggcataggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaattatttaaaaatctgaaattcaagattttaactgagttgttctggtggcataggc 620
Query: 421 ttataatctcagtgattaggaatgctgaagcagggggattaaaaatgcaaagtcagtctg 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 ttataatctcagtgattaggaatgctgaagcagggggattaaaaatgcaaggtcagtctg 680
Query: 481 agctatagagtgaatttaaagccaacctgagcacctattttttttaaaggtaagtaaaaa 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 agctatagagtgaatttaaagccagcctgagcacctattttttttaaaggtaagtaaaaa 740
Query: 541 atgagtagtgatgtaactcaatggaagagctcttgtctagcacacaaaggtctcatattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgagtagtgatgtaactcaatggaagagctcttgtctagcacacaaaggtctcatattt 800
Query: 601 tcttggtattaaaaaatatcccaaaaggaaatggaattattttcatagtttcctgatgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcttggtattaaaaaatatcccaaaaggaaatggaattattttcatagtttcctgatgat 860
Query: 661 tcaacaagtcactgtt 676
||||||||||||||||
Sbjct: 861 tcaacaagtcactgtt 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
