TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCTATTTCACTCTGGAAATATTGGTTATGGGCTAATCCTATACTTCCA
AAGATTGTCCATTGTACACCCATTATTGCTCCCTCTCCTCCAAGAGGAAT
ACGAAAAGGGGCTTTTCGTCTTTATGTCACAAGCCATAGGAAGTCACCTG
AAAGACTATCTGTGGCTTTGGAGCTGTTTACCAATGCTGATATGAATATT
TTCAGCAATTATGGTTTTGTCCAATATTTAGTTACTCCCTGTAATTCCTT
TTCTGTTTTTACTCTTGATGAGATGCTGGACTCATGTGCACATACTCTCT
ACCACATATAGATATTTACTTAATTAAAAGAGTAAAACATAAACTTTAAA
AGAACCACAGCCCAACATATATTGTATATAATATACATATATGAAACAGA
AACTAAAAAAAATTATATTATTTAAATGGCAGAAAAAATGTTTAATCTAA
CATCAGGAGTAAAGGCATTCAAGTGGGGAGATTAGCAGTCTGGTATTCCT
AGACACTGAGAGACTGAGAGGAGGATTACATCTCAAAACCTGTCTGGATT
GCAAAGTTCAAAGCTAGTCTTAGCACTATAGTGAGACCCTGTTAAGGACT
AGGGGTATAGTTTGATGTTACAATGTTTTCCTAGAATGTGGGAGTCCCTA
GGTTCAATTCCCAGAATTTGAAAAACAAAACAAACTAAACTAAAAC

GGAGGGGGTGGTGTTTTGGGNCCNNNCNNCNTTAAAANNNAAAATTATTA
TTTGAGTATGGNTGTGGAAACCTGTTACGGGAGAGGGGGNGNCNNAAAAG
AATTANTCTAAAAAAGGTNGGNGAGAGAGAGNGANNNNNNAANNGNNNNN
NNNNNTTTTTTNNTCGAAAAAAGAGGGGGAAGAAAANNNNNNANNNNNNN
NNNNANNAAAAAAGAANAANGAAAANAAAAAAANAAAAGGGNGAAAAGAG
AAGANAAAAAAAAAAGGAGAGGGAGGAAAAAAAGANGNGGTTTTTTTGAG
AAGNGAGAAAAGAGGAGGGAATGGGGGAGATTTTGATAGATAAAAGAGAA
GATTTTTGGTATTTTAAGAAGAGGAGGAGAAGAGAAGAAGGAGATTTTGG
TGGATTTCCCCCCCCCCCCCCAAAGGAGAAGGAGAGNGGGGGGGGGGGGG
GGNNCAAAAAAAAAAAAAAAAAAAGGGGNNNGGNNNNGGGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGNNNNNNGNNNNNNNGNNNNNNNNNNGNN
NNNNNNNNNNNNNNNNNNNNNNNGNGNGGGGGGGGGGGGGGGGGNGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGNGTTTTTTTTTTTTTTGNGGGGGGT
GGTTGGGGNGGTTTTTTTTGGGGTTTTTTTGGGGTGTTTTTTTGGTTGTT
GGTTGGGTTGTTTTTTTTTTTGGGTTGTTGTGTTN

Query= MSMg01no307_n13.b1 MSMg01no307_n13.b1 CHROMAT_FILE:
MSMg01no307_n13.b1 PHD_FILE: MSMg01no307_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:00 2005
         (599 letters)



>mm_chr8_6766915_6767914
          Length = 1000

 Score = 1106 bits (572), Expect = 0.0
 Identities = 593/600 (98%), Gaps = 1/600 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattattgctccctctcctccaagaggaatacgaaaaggggcttttcgtctttatgtcac 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 201 cattattgctccctctcctccaagaggaatacaaaaaggggcttttcgtctttatttcac 260

                                                                       
Query: 61  aagccataggaagtcacctgaaagactatctgtggctttggagctgtttaccaatgctga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagccataggaagtcacctgaaagactatctgtggctttggagctgtttaccaatgctga 320

                                                                       
Query: 121 tatgaatattttcagcaatt-atggttttgtccaatatttagttactccctgtaattcct 179
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgaatattttcagcaatttatggttttgtccaatatttagttactccctgtaattcct 380

                                                                       
Query: 180 tttctgtttttactcttgatgagatgctggactcatgtgcacatactctctaccacatat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 381 tttctgtttttactcttgatgagatgctggactcatgtgcacatactctctaccacaaac 440

                                                                       
Query: 240 agatatttacttaattaaaagagtaaaacataaactttaaaagaaccacagcccaacata 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 441 agatatttacttaattaaaagagtaaaacataaactttaaaagaaccacagcaaaacata 500

                                                                       
Query: 300 tattgtatataatatacatatatgaaacagaaactaaaaaaaattatattatttaaatgg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattgtatataatatacatatatgaaacagaaactaaaaaaaattatattatttaaatgg 560

                                                                       
Query: 360 cagaaaaaatgtttaatctaacatcaggagtaaaggcattcaagtggggagattagcagt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaaaaaatgtttaatctaacatcaggagtaaaggcattcaagtggggagattagcagt 620

                                                                       
Query: 420 ctggtattcctagacactgagagactgagaggaggattacatctcaaaacctgtctggat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggtattcctagacactgagagactgagaggaggattacatctcaaaacctgtctggat 680

                                                                       
Query: 480 tgcaaagttcaaagctagtcttagcactatagtgagaccctgttaaggactaggggtata 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcaaagttcaaagctagtcttagcactatagtgagaccctgttaaggactaggggtata 740

                                                                       
Query: 540 gtttgatgttacaatgttttcctagaatgtgggagtccctaggttcaattcccagaattt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtttgatgttacaatgttttcctagaatgtgggagtccctaggttcaattcccagaattt 800


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space:   583110
Effective search space used:   583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)