Query= MSMg01no309_h08.b1 MSMg01no309_h08.b1 CHROMAT_FILE:
MSMg01no309_h08.b1 PHD_FILE: MSMg01no309_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:03 2005
(315 letters)
>mm_chr8_68097108_68097824
Length = 717
Score = 534 bits (276), Expect = e-156
Identities = 304/314 (96%), Gaps = 4/314 (1%)
Strand = Plus / Minus
Query: 5 gaattcatcactgaagtgaattctagacagatccagaaaatgtgacagtacaatcatgga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattcatcactgaagtgaattctagacagatccagaaaatgtgacagtacaatcatgga 458
Query: 65 gttactgcaattgttctgattttttaaaagggaacaaaaaaattatagtaactttaagaa 124
|||||||||||||||||||||||||||| ||||| |||||||||| |||||||| |||||
Sbjct: 457 gttactgcaattgttctgattttttaaaggggaagaaaaaaattacagtaacttcaagaa 398
Query: 125 aaagttaaggcacataaagcattagtacatttgtatattagtaaccagatccagtaaaaa 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 397 aaagttaaggcacataaagcattagtacttttgtatattagtaaccagatccattaaaaa 338
Query: 185 gaaaaaaa--tatacaataaaggagctcactaccaggacgcttatagtgccaaagccttt 242
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaaaaaaaaatatacaataaaggagctcactaccaggacgcttatagtgccaaagccttt 278
Query: 243 ggatggaggagaggcaaggagacagg-atctagagtgatagattagaagtcacacatgac 301
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 277 ggatggaggagaggcaaggaga-agggatctagagtgatagattagaagtcacacatgac 219
Query: 302 ttgctccatcttcc 315
||||||||||||||
Sbjct: 218 ttgctccatcttcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 717
Length adjustment: 9
Effective length of query: 306
Effective length of database: 708
Effective search space: 216648
Effective search space used: 216648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_h08.g1 MSMg01no309_h08.g1 CHROMAT_FILE:
MSMg01no309_h08.g1 PHD_FILE: MSMg01no309_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:03 2005
(261 letters)
>mm_chr8_68250664_68251324
Length = 661
Score = 427 bits (221), Expect = e-124
Identities = 245/253 (96%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 1 cttagtcctccattcccccaaaagccagatatgcccatcatacctgtaaactcagtattg 60
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 416 cttagttctccattcccccaaaagccagatatgcccatcatacctctaaactcagtattg 357
Query: 61 taatggaggaatcagacagccagctcggccagaacaaggatcttattcagtgagagacaa 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 356 taatggaggaatcagacagccagctcggccagaacaaggatcttatttagtgagagacaa 297
Query: 121 ccccctccacacacacaaatgaaaaacaaccaacacaaacacaaaagacattaaaatgaa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 296 ccccctccacacacacaaatgaaaaacaaccaacacaaacacaaaacacattaaaatgaa 237
Query: 181 atatacatagcagggtctctcctattacaacaagattgtgtgtgtgtgtgtgtgtgtgtg 240
|||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 236 atatacatagcagggtttctcctattaaaacaagattttgtgtgtgtgtgtgtgtgtgtg 177
Query: 241 tgtgtgtgtgtgt 253
|||||| ||||||
Sbjct: 176 tgtgtg-gtgtgt 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
