Query= MSMg01no309_k09.b1 MSMg01no309_k09.b1 CHROMAT_FILE:
MSMg01no309_k09.b1 PHD_FILE: MSMg01no309_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:17 2005
(270 letters)
>mm_chr8_18116641_18117311
Length = 671
Score = 503 bits (260), Expect = e-147
Identities = 266/268 (99%), Gaps = 1/268 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgta-aaaactgagacagaattccacatctggccttctgattggaaggaaaag 62
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtacaaaactgagacagaattccacatctggccttctgattggaaggaaaag 263
Query: 63 aaggatccatgagaataagtctgaaagggatgaaaggccataattgtccctggttgaaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaggatccatgagaataagtctgaaagggatgaaaggccataattgtccctggttgaaac 323
Query: 123 gtttagagtatatttaaactctaaccagctattggtgttatgtacagcagattgtaggtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtttagagtatatttaaactctaaccagctattggtgttatgtacagcagattgtaggtg 383
Query: 183 tcgatcttgactgagggtttcatagttccctgagtcaatagatcagcactagatggaaag 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcgatcttgactgagggtttcatagttccctgagtcaatagatcagcactagatggaaaa 443
Query: 243 ggagcaggttgggctcacagcaatgatc 270
||||||||||||||||||||||||||||
Sbjct: 444 ggagcaggttgggctcacagcaatgatc 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no309_k09.g1 MSMg01no309_k09.g1 CHROMAT_FILE:
MSMg01no309_k09.g1 PHD_FILE: MSMg01no309_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:17 2005
(224 letters)
>mm_chr8_18278553_18279176
Length = 624
Score = 400 bits (207), Expect = e-116
Identities = 219/223 (98%)
Strand = Plus / Minus
Query: 2 gtgtacttctgtgtctggatagagatgttataagtatccttgctttatctatctaagctt 61
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 323 gtgtacttctgtgtctggatagagatgttataagtatctttgctttatctatctatgctt 264
Query: 62 ccaggggctctgagcacagagtagaggcttcctgtttgtaactcctgaggtagagtgaga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccaggggctctgagcacagagtagaggcttcctgtttgtaactcctgaggtagagtgaga 204
Query: 122 gagtgagtgagtgagtgtatgtgtgtgtgtgtctgtatgcgtgtgtacatacatatgaat 181
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gagtgagtgagtgagtgtctgtgtgtgtgtgtctgtatgcgtgtgtacatacatatgaat 144
Query: 182 atgcagtaagtcttgtaaaatgtgtcctttgttgttttgtaat 224
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atacagtaagtcttgtaaaatgtgtcctttgttgttttgtaat 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
