Query= MSMg01no311_h02.b1 MSMg01no311_h02.b1 CHROMAT_FILE:
MSMg01no311_h02.b1 PHD_FILE: MSMg01no311_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:17 2005
(222 letters)
>mm_chr8_37669045_37669665
Length = 621
Score = 398 bits (206), Expect = e-115
Identities = 215/218 (98%), Gaps = 1/218 (0%)
Strand = Plus / Minus
Query: 5 gaattccagcagattgtccaaactccggaccacacccttataacaggaaaaagtcccatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaattccagcagattgtccaaactccggaccacacccttataacaggaaaaagtcccatg 275
Query: 65 tgtatgtaagcaccctgttccctgcctccccaggactcagaatgccagggcaagaagtaa 124
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 274 tgtatgtcagcaccctgttccctgcctccccaggactcagaatgccaggg-aagaagtaa 216
Query: 125 aactttaaagaatacatacatacatacatacatatttatactgatgtataatatatattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aactttaaagaatacatacatacatacatacatatttatactgatgtataatatatattt 156
Query: 185 taaaaatatataacatatatctttatatataacacagt 222
||||||||||||| ||||||||||||||||||||||||
Sbjct: 155 taaaaatatataaaatatatctttatatataacacagt 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 621
Length adjustment: 9
Effective length of query: 213
Effective length of database: 612
Effective search space: 130356
Effective search space used: 130356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no311_h02.g1 MSMg01no311_h02.g1 CHROMAT_FILE:
MSMg01no311_h02.g1 PHD_FILE: MSMg01no311_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:18 2005
(148 letters)
>mm_chr8_37506966_37507513
Length = 548
Score = 279 bits (144), Expect = 7e-80
Identities = 147/148 (99%)
Strand = Plus / Plus
Query: 1 ttttctctttacttactctgtgttcaggagatagagatgaaggagggaggtaaggaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttctctttacttactctgtgttcaggagatagagatgaaggagggaggtaaggaaaga 260
Query: 61 ggaaggaaggcagcaagcaggtaccactgcttctgacatcctactcaccagagtcaggtc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ggaaggaaggcagcaagcaggtaccactgcttctgacatcctactctccagagtcaggtc 320
Query: 121 acatggacaaggtaccagttgactgcaa 148
||||||||||||||||||||||||||||
Sbjct: 321 acatggacaaggtaccagttgactgcaa 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 548
Length adjustment: 8
Effective length of query: 140
Effective length of database: 540
Effective search space: 75600
Effective search space used: 75600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
