Query= MSMg01no311_i09.b1 MSMg01no311_i09.b1 CHROMAT_FILE:
MSMg01no311_i09.b1 PHD_FILE: MSMg01no311_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:24 2005
(321 letters)
>mm_chr8_115088045_115088768
Length = 724
Score = 557 bits (288), Expect = e-163
Identities = 311/320 (97%), Gaps = 3/320 (0%)
Strand = Plus / Plus
Query: 5 gaattcagagagtcaggagaggaaaatcaaacagggaaaacagtggaaggtgactgatgg 64
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattcagagagtcaggagagaaaaatcaaacagggaaaacagtgggaggtgactgatgg 264
Query: 65 tgggaacgagagacgagctgc---gaagagacccggaagtagaagatccagagctgtagg 121
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgggaacgagagacgagctgcggagaagagacccggaagtagaagatccagagctgtagg 324
Query: 122 gccggggtgactgacagaggagggcagaatgaacacacttgaaggcagggcaccccaaac 181
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccggggtgactgacagaggaggacagaatgaacacacttgaaggcagggcaccccaaac 384
Query: 182 actcatgctagaaagctgtaagaaaaaaccaaaggatgcagaaaagtcgaggcagagaaa 241
||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 385 actcatgctagaaagctgtaagaaaaaaccaaagggtacagaaaagtcaaggcagagaaa 444
Query: 242 acagatcacagggcttcggaatgaaaagggagaaagagaatatcggataaaataatgggc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagatcacagggcttcggaatgaaaagggagaaagagaatatcggataaaataatgggc 504
Query: 302 cccaggtctcctaaatctga 321
||||||||||||||||||||
Sbjct: 505 cccaggtctcctaaatctga 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 724
Length adjustment: 9
Effective length of query: 312
Effective length of database: 715
Effective search space: 223080
Effective search space used: 223080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_i09.g1 MSMg01no311_i09.g1 CHROMAT_FILE:
MSMg01no311_i09.g1 PHD_FILE: MSMg01no311_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:24 2005
(293 letters)
>mm_chr8_115274288_115274980
Length = 693
Score = 567 bits (293), Expect = e-166
Identities = 293/293 (100%)
Strand = Plus / Minus
Query: 1 attcacatgaataaacatcacattccttagaaagaataatgctagccgaacaatcattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 attcacatgaataaacatcacattccttagaaagaataatgctagccgaacaatcattcc 434
Query: 61 ttgttatatagttgaatgaatgtgcgtggctaaaacgtaactctttgtcaaacacaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttgttatatagttgaatgaatgtgcgtggctaaaacgtaactctttgtcaaacacaaatg 374
Query: 121 atgttttctaccattactagatggcaataaattaagaaaaatttcagccagatagacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atgttttctaccattactagatggcaataaattaagaaaaatttcagccagatagacttt 314
Query: 181 aaatgctgacacatttggagcaatgcagttatctctgacttaatgtattgcttagaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaatgctgacacatttggagcaatgcagttatctctgacttaatgtattgcttagaggca 254
Query: 241 actatcagagtaatgattttattttagataaagactatttttggaattagcta 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 actatcagagtaatgattttattttagataaagactatttttggaattagcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
