Query= MSMg01no312_e06.b1 MSMg01no312_e06.b1 CHROMAT_FILE:
MSMg01no312_e06.b1 PHD_FILE: MSMg01no312_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:18 2005
(585 letters)
>mm_chr8_3224538_3225522
Length = 985
Score = 1064 bits (550), Expect = 0.0
Identities = 576/590 (97%), Gaps = 9/590 (1%)
Strand = Plus / Plus
Query: 5 gaattcataatataccttctccatcttcccttttaccctacccatatcccaccagtccgc 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gaattcataatataatttctccatcttcccttttaccctacccatatcccaccagtccgc 255
Query: 65 caaaggatccaggtccatcccaaaagatttgtcaggcaa---------attttttttaaa 115
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 256 caaaggatccaggtccatcccaaaagatttgtcaggcaacctaaaacaattttttttaaa 315
Query: 116 tcccaatagcaggtagtaaaatgactgtatttcacataggtacctttgtcggtgcctgga 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tcccaatagcaggtagtaaaatgactgtatttcacataggtacctttgtcggtgcctgga 375
Query: 176 aatgtctgcaaggcctcccacacagtagcagaacactcaggattgaagaggggaaacgtg 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aatgtctgcaaggcctcccacacagtagcagaacactcaggattgaagaggggaaacgtg 435
Query: 236 gaatgcccaatgttcctctcagaaatcaagatttagaaaaccataatttgagggctcttg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaatgcccaatgttcctctcagaaatcaagatttagaaaaccataatttgagggctcttg 495
Query: 296 agcacattcctccatgaggcctatgattgtgggataccaggggaattgggaacatgagcc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agcacattcctccatgaggcctatgattgtgggataccaggggaattgggaacatgagcc 555
Query: 356 tagagtgaaatctgggctcacgactaaaatgagttttcttaaaagggggtaggaggcagc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tagagtgaaatctgggctcacgactaaaatgagttttcttaaaagggggtaggaggcagc 615
Query: 416 taagtcagctcatacagacagaagttgaggggaggagcagttgctgaggttataaggaag 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 taagtcagctcatacagacagaagttgaggggaggagcagttgctgaggttataaggaag 675
Query: 476 ttggaaatcaagaaattctcactaaggcaaacgaagttctactctcaagtaaaacacatg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ttggaaatcaagaaattctcactaaggcaaacgaagttctactctcaagtaaaacacatg 735
Query: 536 tccacccagctacatcatcctaccctgccctgagaaaggagaattgcagg 585
||||||||| ||| || |||||||||||||||||||||||||||||||||
Sbjct: 736 tccacccagttacgtcttcctaccctgccctgagaaaggagaattgcagg 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_e06.g1 MSMg01no312_e06.g1 CHROMAT_FILE:
MSMg01no312_e06.g1 PHD_FILE: MSMg01no312_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:18 2005
(287 letters)
>mm_chr8_3394930_3395616
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Minus
Query: 1 agtttactcccaacttgatttgaatgagaaagaaacagatcccaggacagacagatggca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 486 agtttactcccaacttgatttgaatgagaaagaaacagatcccaggagagacagatggca 427
Query: 61 gcaggaactgaccagcaccgtgctctcagggaggacgttgttttaaagttttcctccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gcaggaactgaccagcaccgtgctctcagggaggacgttgttttaaagttttcctccctc 367
Query: 121 agctagctagctgcattcctcctttaaaaataaattcctccagtccctccagagctaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agctagctagctgcattcctcctttaaaaataaattcctccagtccctccagagctaccc 307
Query: 181 cctgaactgtcttgcacctggcgagggagtttttcacaaggtagccatctccccttcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cctgaactgtcttgcacctggcgagggagtttttcacaaggtagccatctccccttcccg 247
Query: 241 ttcagcagggaaagtgtttgctttaacaagacagaaagaaacaaga 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttcagcagggaaagtgtttgctttaacaagacagaaagaaacaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
