Query= MSMg01no312_k02.b1 MSMg01no312_k02.b1 CHROMAT_FILE:
MSMg01no312_k02.b1 PHD_FILE: MSMg01no312_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:45 2005
(640 letters)
>mm_chr8_92534745_92535784
Length = 1040
Score = 1222 bits (632), Expect = 0.0
Identities = 635/636 (99%)
Strand = Plus / Plus
Query: 5 gaattcttcagtactccttcaaaaagtagagcactttcaatttgaataggaatcaatgac 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcagtacttcttcaaaaagtagagcactttcaatttgaataggaatcaatgac 264
Query: 65 tgagtccctaacaagtgaaatctaaactatgggagaagatgtagttgtcacttctcagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgagtccctaacaagtgaaatctaaactatgggagaagatgtagttgtcacttctcagaa 324
Query: 125 tcagtcctcaaaggcaccgtggcttccccctctttttaaattgctcttgagcatgccagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcagtcctcaaaggcaccgtggcttccccctctttttaaattgctcttgagcatgccagc 384
Query: 185 ctccatattgtcggttcatgtaaacagtcttatgtataaacccacaaggtaagcagaggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctccatattgtcggttcatgtaaacagtcttatgtataaacccacaaggtaagcagaggt 444
Query: 245 ctcctttcaatcaccgcaagaaatggatatctcttggcctcagctaactttctgaaagag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcctttcaatcaccgcaagaaatggatatctcttggcctcagctaactttctgaaagag 504
Query: 305 ctgcccttatccgaagtttgacatcggatagttgaccgatgccagaaccaacatcatgcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgcccttatccgaagtttgacatcggatagttgaccgatgccagaaccaacatcatgcc 564
Query: 365 agatccacctatcagagttgcttccaaatccctgaccacatgtactataagacagtgagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agatccacctatcagagttgcttccaaatccctgaccacatgtactataagacagtgagc 624
Query: 425 atctgctgcaatcagctgtgaagttgagggtgataggctacactgtgatagataattaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atctgctgcaatcagctgtgaagttgagggtgataggctacactgtgatagataattaat 684
Query: 485 ccaggtggtgacactcctatagactgagtggatgggaaaaataaagaacattagggaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccaggtggtgacactcctatagactgagtggatgggaaaaataaagaacattagggaata 744
Query: 545 aagtaaatgacagactcctcatttccaaacacatgttctaattctctgaaacctaaaagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagtaaatgacagactcctcatttccaaacacatgttctaattctctgaaacctaaaagt 804
Query: 605 ggcaggttagctggagttaagtgaagaaaaacaatt 640
||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggcaggttagctggagttaagtgaagaaaaacaatt 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_k02.g1 MSMg01no312_k02.g1 CHROMAT_FILE:
MSMg01no312_k02.g1 PHD_FILE: MSMg01no312_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:45 2005
(287 letters)
>mm_chr8_92696088_92696774
Length = 687
Score = 536 bits (277), Expect = e-157
Identities = 284/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 atctttaaaaggcaattaatgacagaaaattagaaaagtcgtatccacgctcagtatcga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 399 atctttaaaaggcaattaatgacagaaaattagaaaagtcgtatccaggctcagtatcga 340
Query: 61 attctgtgacagaatggagatgtgtgccacagataaagaaagaataagcacacacacatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 attctgtgacagaatggagatgtgtgccacagataaagaaagaataagcacacacacatg 280
Query: 121 tgtaacaatcacattgttttcaaagttcctactgtaccaaatgtcctctgattatgtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgtaacaatcacattgttttcaaagttcctactgtaccaaatgtcctctgattatgtgtc 220
Query: 181 ttcaacccaccatagatgcaaaaaaaaaacaaaaaacaaaaaaaaaaaaa--caaaacaa 238
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 219 ttcaacccaccatagatgcaaaaaaaaaacaaaaaacaaaaaaaaaaaaaaacaaaacaa 160
Query: 239 aaaaccagactgcagcccttctttactgtgatgatcagtatgctgat 285
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aaaaccagactgcagcccttctttactgtgatgatcagtatgctgat 113
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
