Query= MSMg01no312_m02.b1 MSMg01no312_m02.b1 CHROMAT_FILE:
MSMg01no312_m02.b1 PHD_FILE: MSMg01no312_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:54 2005
(680 letters)
>mm_chr8_17754358_17755437
Length = 1080
Score = 1245 bits (644), Expect = 0.0
Identities = 668/676 (98%)
Strand = Plus / Plus
Query: 5 gaattcaaatctgatcctactcttggtaaaccttctacaaggctaaatatttttaatttc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaatctgagcctactcttggtaaaccttctacaaggctaaatatttttaatttc 264
Query: 65 ttgtccttaatgggacactgatgcattttggatactctgaggttattgctaatgcattaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtccttaatgggacactgatgcattttggatactctgaggttattgctaatgcattaa 324
Query: 125 aaatgatgcaaatgagccttttcttctttagtcaagagctgaaggcagagccttaggccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaatgatgcaaatgagccttttcttctttagtcaagagctgaaggcagagccttaggccc 384
Query: 185 ctttccatggatcattagctgggtacctgtaggctctccaacatcagccgtctctggctc 244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 ctttccatggatcattagctgggtacctgcaggctctccaacatcagccgtctctggctc 444
Query: 245 cagagccaaactgatggctgggtgaatccctcaggactaaaatcactgtccctctaggag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagagccaaactgatggctgggtgaatccctcaggactaaaatcactgtccctctaggag 504
Query: 305 tcctacctattaaagtgctctgtgggtaaagtgttgtgtactgagaaggaagggtataca 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcctgcctattaaagtgctctgtgggtaaagtgttgtgtactgagaaggaagggtataca 564
Query: 365 aagagccccacacttcacttcatagagaaactataaatcctagactgtcttctggaccca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagagccccacacttcacttcatagagaaactataaatcctagactgtcttctggaccca 624
Query: 425 aatcctcctgaatcattgataaaggtgggactcgagtcactgctccaagtagtattacag 484
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 625 aatcctcctgaatcattgataaagttgggactcaagtcactgctccaagtagtattacag 684
Query: 485 agaggacaaggtgttgtacgcagctcaacatgcttgcagtgtcaggcaaaataattgtat 544
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggggacaaggtgttgtacacagctcaacatgcttgcagtgtcaggcaaaataattgtat 744
Query: 545 caatccaaaggctgtgggatgcatttctacagatttaatgtgtggtccttggggtctttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caatccaaaggctgtgggatgcatttctacagatttaatgtgtggtccttggggtctttt 804
Query: 605 taaagtgaaaggttggacactcctgtaagaaactgaggcttatgctgatgggaaatgata 664
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taaagtgaaaggatggacactcctgtaagaaactgaggcttatgctgatgggaaatgata 864
Query: 665 tattgggtaaagggcc 680
||||||||||||||||
Sbjct: 865 tattgggtaaagggcc 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_m02.g1 MSMg01no312_m02.g1 CHROMAT_FILE:
MSMg01no312_m02.g1 PHD_FILE: MSMg01no312_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:54 2005
(293 letters)
>mm_chr8_17924309_17925002
Length = 694
Score = 530 bits (274), Expect = e-155
Identities = 289/294 (98%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 1 tcatgatatctcaaaggtgacaatcacctgatggaaacatggggttggggagtgttaaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 494 tcatgatatctcaaaggtgacaatcacctgatggaaacatggggttggggagtgttgaca 435
Query: 61 agtaagagtgcagtggttacaactgctaactctacctgttggagcgaggtgtatcaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agtaagagtgcagtggttacaactgctaactctacctgttggagcgaggtgtatcaaact 375
Query: 121 caccaacatggcttaaataagagcagaggacatagcaatt-ttcatgaagacaagaacct 179
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 374 caccaacatggcttaaataagagcagaggacatagcaattactcatgaagacaagaacct 315
Query: 180 ctgtgagcgacagattctcattgtaaaaagtttgccatttctataaattatatacactta 239
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctgtgagcgacagattctcactgtaaaaagtttgccatttctataaattatatacactta 255
Query: 240 gttggccagcatttcaattctacaaaatgttgaaaaacaagccatatattttta 293
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gttggccagcattccaattctacaaaatgttgaaaaacaagccatatattttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 694
Length adjustment: 9
Effective length of query: 284
Effective length of database: 685
Effective search space: 194540
Effective search space used: 194540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
