Query= MSMg01no312_o11.b1 MSMg01no312_o11.b1 CHROMAT_FILE:
MSMg01no312_o11.b1 PHD_FILE: MSMg01no312_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:05 2005
(694 letters)
>mm_chr8_33206162_33207255
Length = 1094
Score = 1288 bits (666), Expect = 0.0
Identities = 666/666 (100%)
Strand = Plus / Minus
Query: 29 gaactactattctgttgtgaccatcctggtcaagacctgcataaaagcctccattcaaaa 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gaactactattctgttgtgaccatcctggtcaagacctgcataaaagcctccattcaaaa 1035
Query: 89 ttaacattaaaattttctccccttcccctttttttaagacaagttcttggtatgttgccc 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 ttaacattaaaattttctccccttcccctttttttaagacaagttcttggtatgttgccc 975
Query: 149 atgctaactttaaactcaagatccccctgtctccaccttctgtatgctgggattatagct 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 atgctaactttaaactcaagatccccctgtctccaccttctgtatgctgggattatagct 915
Query: 209 gtgcgccatcacactgagcttcctcctctttgactgaactcattttttacatgagatgga 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 gtgcgccatcacactgagcttcctcctctttgactgaactcattttttacatgagatgga 855
Query: 269 tcaggtcatatttccttttaatcctgtgacatcgccaaaaacatctagtagggtgtcagg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tcaggtcatatttccttttaatcctgtgacatcgccaaaaacatctagtagggtgtcagg 795
Query: 329 aagaaggatgtcacaaatcaccccacaatctcgtaaagctaaagaggtttgctctggatt 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 aagaaggatgtcacaaatcaccccacaatctcgtaaagctaaagaggtttgctctggatt 735
Query: 389 cctaatttcttaaaatatggctccaaattcattagaacccccccacccccaccccactct 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 cctaatttcttaaaatatggctccaaattcattagaacccccccacccccaccccactct 675
Query: 449 ccaagagcacatgaggctttgatctcaggggggggggggctgctgcttcaagaagagtga 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ccaagagcacatgaggctttgatctcaggggggggggggctgctgcttcaagaagagtga 615
Query: 509 tggaccaatggctgccctcccatgggacagtaaggaaaaggtaggttctttcctttccat 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tggaccaatggctgccctcccatgggacagtaaggaaaaggtaggttctttcctttccat 555
Query: 569 ttctccagaataggagctcatcaaacctcagcaaactgatggcatcatgaactaaacttt 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttctccagaataggagctcatcaaacctcagcaaactgatggcatcatgaactaaacttt 495
Query: 629 agtaagttcttaggagtattaagagaaagaagtcagcactaaaataccagcatacaaaaa 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agtaagttcttaggagtattaagagaaagaagtcagcactaaaataccagcatacaaaaa 435
Query: 689 tatgat 694
||||||
Sbjct: 434 tatgat 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_o11.g1 MSMg01no312_o11.g1 CHROMAT_FILE:
MSMg01no312_o11.g1 PHD_FILE: MSMg01no312_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:05 2005
(670 letters)
>mm_chr8_33180707_33181776
Length = 1070
Score = 1276 bits (660), Expect = 0.0
Identities = 666/670 (99%), Gaps = 4/670 (0%)
Strand = Plus / Plus
Query: 1 tctctactttcccccataccttaaaatttcctacccattttttgtcagtaataaaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctactttcccccataccttaaaatttcctacccattttttgtcagtaataaaacaaa 260
Query: 61 aacaaacaaacaaaaaaatacaaaacccaccaagggaaaactactagaattccatgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaacaaacaaaaaaatacaaaacccaccaagggaaaactactagaattccatgaaga 320
Query: 121 actttcaaaaatatctggaggttattaaattagtgagagctcactttgacttcttaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttcaaaaatatctggaggttattaaattagtgagagctcactttgacttcttaccag 380
Query: 181 gtggctcccatcccttcctgcttgtcctctgtgtttctttaaggggatgcaagcaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggctcccatcccttcctgcttgtcctctgtgtttctttaaggggatgcaagcaggaga 440
Query: 241 gggaggaatcaaataagcaaataaaacaacaaaacaacaacagcagcagcagcaacaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggaggaatcaaataagcaaataaaacaacaaaacaacaacagcagcagcagcaacaaca 500
Query: 301 acacttaaatgcacaccgaaagtatcaagctctcccacaaatagtacctgtaaaatcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacttaaatgcacaccgaaagtatcaagctctcccacaaatagtacctgtaaaatcctc 560
Query: 361 tcctaaatgtgaagaaaacaaaaaagagagatgactccacagcctgctcacaagcttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctaaatgtgaagaaaacaaaaaagagagatgactccacagcctgctcacaagcttaaa 620
Query: 421 cactggtcttgtaagtatactgtggtattaacactgattcagaaatcccaacacacacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactggtcttgtaagtatactgtggtattaacactgattcagaaatcccaacacacacac 680
Query: 481 acacacacacacacacacacacacacacacacacacacacacacacagccttcgaaagat 540
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 acacacacacacacacacacacacacacacacacacacacaca----gccttcgaaagat 736
Query: 541 gcattgaaagactgatatcaggagaaatagaggacaaaggccagaaactcacaaacagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gcattgaaagactgatatcaggagaaatagaggacaaaggccagaaactcacaaacagga 796
Query: 601 tctgtgggagtaaccgcccctccctctttatctacacgatttctttctggataagcccta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tctgtgggagtaaccgcccctccctctttatctacacgatttctttctggataagcccta 856
Query: 661 tggaaatgga 670
||||||||||
Sbjct: 857 tggaaatgga 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
