Query= MSMg01no315_g07.b1 MSMg01no315_g07.b1 CHROMAT_FILE:
MSMg01no315_g07.b1 PHD_FILE: MSMg01no315_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:50 2005
(368 letters)
>mm_chr8_11069789_11070556
Length = 768
Score = 656 bits (339), Expect = 0.0
Identities = 355/361 (98%), Gaps = 2/361 (0%)
Strand = Plus / Minus
Query: 6 gaattctggtacaccatgaattcttgacaagccttgtcagaaggaccataaattgttggg 65
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaattctggtacaggatgaattcttgacaagccttgtcagaaggaccataaattgttggg 655
Query: 66 ccaggccagcaggtggctcctattctcaaacaccattcacacacacacacacacacacac 125
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 654 ccaggccagcaggtggctcctattctcaaacaccatt--cacacacacacacacacacac 597
Query: 126 acacacacacacacacacacacacacacaccccttttcttgcaggtggattgttattccc 185
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 596 acacacacacacacacacacacacatacaccccttttcttgcaggtggattgttattccc 537
Query: 186 ctatgcacaggtcagtgcagcctttggatagaggaccctctcatgacctcggtgaccttg 245
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 536 ctatgcacaggtcagtgcagcctttggatagaggaccctctcacgacctcggtgaccttg 477
Query: 246 agcagacccggtcagatgaagcctatgtagaacctgtggcttggagcaaatgcttcctct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agcagacccggtcagatgaagcctatgtagaacctgtggcttggagcaaatgcttcctct 417
Query: 306 attgactcccaccctgtcaataaatctgggatctttggaaatcatggggtttcaacccct 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 attgactcccaccctgtcaataaatctgggatctttggaaatcatggggtttcaacccct 357
Query: 366 g 366
|
Sbjct: 356 g 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_g07.g1 MSMg01no315_g07.g1 CHROMAT_FILE:
MSMg01no315_g07.g1 PHD_FILE: MSMg01no315_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:50 2005
(338 letters)
>mm_chr8_11014947_11015684
Length = 738
Score = 630 bits (326), Expect = 0.0
Identities = 335/338 (99%)
Strand = Plus / Plus
Query: 1 ccatctgtatgtcctatgactccacatattcataaaagagtaaacaagagaatttgggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatctgtatgtcctatgactccacatattcataaaagagtaaacaagagaatttgggct 260
Query: 61 ggggatatagctcagtagtgaaatgttgaccaacatggatggaaccctaggctgcaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggatatagctcagtagtgaaatgttgaccaacatggatggaaccctaggctgcaacca 320
Query: 121 aaaagaaaacaaagccatttagctcttcacgcatgtcttatacttttgccttatttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagaaaacaaagccatttagctcttcacgcatgtcttatacttttgccttatttaaaa 380
Query: 181 catttctaacacaaatgatagtaactaaactaagcaactgaaaagtacacacattctcaa 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 catttctaacacaaatgatagtaactaaactaagtaactgaaaagtacacacattctcaa 440
Query: 241 tttccccaaaacaaagtaaccaaatcagcttgtgaaatgcaggcagtatcccctgaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttccccaaaacaaagtaaccaaatcagcttgtgaaatgcaggcagtatcccctgaaact 500
Query: 301 gctcatccggaggctgaaaactgccctttatacagaca 338
|||||||| ||||||| |||||||||||||||||||||
Sbjct: 501 gctcatccagaggctggaaactgccctttatacagaca 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
