Query= MSMg01no315_g21.b1 MSMg01no315_g21.b1 CHROMAT_FILE:
MSMg01no315_g21.b1 PHD_FILE: MSMg01no315_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:53 2005
(659 letters)
>mm_chr8_29203943_29205001
Length = 1059
Score = 1174 bits (607), Expect = 0.0
Identities = 643/657 (97%), Gaps = 5/657 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttaaaaattacctaaaaaatgtgtagttataaaactggaatttcagtgtttaa 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaaaaattaaataaaaaatgtgtagttataaaactggaatttcagtgtttaa 263
Query: 64 tatttgtaggttattgaggcacattacccagaggtcccagaaaagatagaataaacattg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatttgtaggttattgaggcacattacccagaggtcccagaaaagatagaataaacattg 323
Query: 124 aagaaaataaaattgaaaactcctgtaatttgtccaagtaaatgctgagtcaaatgagat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagaaaataaaattgaaaactcctgtaatttgtccaagtaaatgctgagtcaaatgagat 383
Query: 184 ctagggcagcattcgttcaggaggcagggagcagaaggtgaggtttaagggttatggtaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctagggcagcattcgttcaggaggcagggagcagaaggtgaggtttaagggttatggtaa 443
Query: 244 ctgaagtgtgggtgtaaagcttaagaggggatgaaggtggcttctgtaatgctttcagta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgaagtgtgggtgtaaagcttaagaggggatgaaggtggcttctgtaatgctttcagta 503
Query: 304 ttcatatcctttcaaaatttttaaaaagcttatttatttattatatgtaagtacactgta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcatatcctttcaaaatttttaaaaagcttatttatttattatatgtaagtacactgta 563
Query: 364 gctgtcttcacacaccccacaagagggagtcagatcttgttacagatggttgtgagccac 423
|||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 564 gctgtcttcagacactccagaagagggagtcagattttgttacagatggttgtgagccac 623
Query: 424 catgtggttgctgggatttgaactccggaccttcggaagagcagtcgggtgctcttaccc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 catgtggttgctgggatttgaactccggaccttcggaagagcagtcgggtgctcttaccc 683
Query: 484 actgagccatctcaccggcctgagatgtgtaagttttatctgctgaataatcatactact 543
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 684 actgagtcatctcaccggcctgagatgtgt----tttatctgctgaataatcatactact 739
Query: 544 actagttacaagttcccagatgtttcctttaaagggtgatcaaggttaggtagagaacac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 actagttacaagttcccagatgtttcctttaaagggtgatcaaggttaggtagagaacac 799
Query: 604 tctgtggagtgatgctaatgggttt-aggacagtctggaaggggctgctgcatgcat 659
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 800 tctgtggagtgccgctaatgggttttaggacagtctggaaggggctgctgcatgcat 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_g21.g1 MSMg01no315_g21.g1 CHROMAT_FILE:
MSMg01no315_g21.g1 PHD_FILE: MSMg01no315_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:53 2005
(342 letters)
>mm_chr8_29368991_29369732
Length = 742
Score = 652 bits (337), Expect = 0.0
Identities = 340/341 (99%)
Strand = Plus / Minus
Query: 1 cctgggaatcatggcagtatgtgctcacatcattctctggaactgttctctggacaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctgggaatcatggcagtatgtgctcacatcattctctggaactgttctctggacaaaaa 482
Query: 61 tccatttaacttattctcagccatcatagctgttttcccgaatcataaaatccccattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccatttaacttattctcagccatcatagctgttttcccgaatcataaaatccccattat 422
Query: 121 gaaataaaccctgacatcgacttgattagtatgagcataaatctgaacagtggtgtgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaataaaccctgacatcgacttgattagtatgagcataaatctgaacagtggtgtgctt 362
Query: 181 gctttaaactgcattttcacacgccacaattagagattctattatttctaccgtggcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 gctttaaactgcattttcacacgccacaattagagattctattatttctaccgtgacaat 302
Query: 241 tagagattatttcaatatattgccaattgttcggtagttatttgtttaatgcatttaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagagattatttcaatatattgccaattgttcggtagttatttgtttaatgcatttaaag 242
Query: 301 gacttattggtttaaaactattgacacaaagtttcaggaaa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacttattggtttaaaactattgacacaaagtttcaggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
