XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCACCCGTATCCCTACTGAATGGCTGAGAAGCACCTGAAAAAATGTTCA
ACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCA
GCTCACACCAGTCAGAATGGCTAAGATGAAAAATTCCGGTGACAGCAGAT
GCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAT
TGCAAGCTTGTACAACCACTCAGGAAATCAATCTGGCGGTTCCTCAGAAA
ATTGGACATAGTACTACCGGAGCATCTAGCAATACCTCTCCTGGGTATAT
ATCCAGAAGTTGTCCCAACCCGTAAGAAGGACACATGCTCCACTATGTTC
ATAGCAGCCTTATTTACAACAGCCAGAAGCTGGAAAGAACCCAGTTGCCC
CTCAACAGAGGAATGGATACAAAAAAATGTGGTACATTTACACAATGGAG
TACTATTTAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATG
GTTGGACCTGGAGGCATCATCCTGAGTGAGGTAACACAATCACAAAAGAA
CTCATATGATACATACTCACTGATAAGTGGATATTTAGCCCAGAACTGTA
TACCCGAGATATTAGATACACTTTTGTTAAACACATGAGACTGAAGAATA
ACGAAGACCCAAGGGTGCA

NCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATAAAAAAGTTTCTTCTGTTTCT
TGATCATAGTTTTTCAATAAATTTCTAAGATGAGACTGTAAGTCTGCAGT
TAATTTTTCTTGTAAATAAGTAAGTTATATCTGCAGAATAATGTCAGTGT
CATCAGAAAGGATGGAAAATATTCCTTCTTCTTGAAAATACTCTTTTTTA
AATTTAAATTTTATTTTACATACCAGACACAGTTTTATAGATAATATTTT
TATTTATCAAAACAATCTCCATAATAATGCCAACACAATTCTTCAAAGAT
AATGAAAGGGCAATTTTCAAATTCATCTGGAAAAACAAAAAAACTATATT
AATAAACACTATTCTTGACAACAAAAAGATTTCTCAAGGAATCATCACCC
ATTATTTCAAGGTATACTATAGTATAATAGTGGCAAAAACTTCCTGGTAT
TGATACAGAGACAGACATGGAATATTATTGATAACACAGAAATAAAACCA
TCCACTTATAGACACTTGATCTTTGACTAAGTATGCAAATATATACAATA
TAAAAAGGAAACCATCTTTTATGAATTGTGGTGGTCTACCTGGCAGTCTC
TATGTACAAAAATTAATATAGACCCATATTTGTCACCTTTCACAAACCTC
AAGTCTAAGTGGGTCAGGACCTCAACAN

Query= MSMg01no315_h01.g1 MSMg01no315_h01.g1 CHROMAT_FILE:
MSMg01no315_h01.g1 PHD_FILE: MSMg01no315_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:54 2005
         (431 letters)



>mm_chr8_61761311_61762141
          Length = 831

 Score =  640 bits (331), Expect = 0.0
 Identities = 358/367 (97%), Gaps = 1/367 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tataaaaaagtttcttctgtttcttgatcatagtttttcaataaatttctaagatgagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tataaaaaagtttcttctgtttcttgatcatagtttttcaataaatttctaagatgagac 308

                                                                       
Query: 61  tgtaagtctgcagttaatttttcttgtaaataagtaagttatatctgcagaataatgtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgtaagtctgcagttaatttttcttgtaaataagtaagttatatctgcagaataatgtca 248

                                                                       
Query: 121 gtgtcatcagaaaggatggaaaatattccttcttcttgaaaatactcttttttaaattta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtgtcatcagaaaggatggaaaatattccttcttcttgaaaatactcttttttaaattta 188

                                                                       
Query: 181 aattttattttacataccagacacagttttatagataatatttttatttatcaaaacaat 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 187 aattttattttacataccagacacagctttatagataatatttttatttatcaaaacaat 128

                                                                       
Query: 241 ctccataataatgccaacacaattcttcaaagataatgaaagggcaattttcaaattcat 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ctccataaaaatgccaacacaattcttcaaagataatgaaagggcaattttcaaattcat 68

                                                                       
Query: 301 ctggaaaaac-aaaaaaactatattaataaacactattcttgacaacaaaaagatttctc 359
           |||||||||| |||||||| | | |||||||||  ||||||||||| |||||||||||||
Sbjct: 67  ctggaaaaacaaaaaaaacaagaataataaacaaaattcttgacaataaaaagatttctc 8

                  
Query: 360 aaggaat 366
           |||||||
Sbjct: 7   aaggaat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space:   346884
Effective search space used:   346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)