XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTTCTTTATTCCTCTACCATCATTATGAGATATGCTTTTAAATCCAGGTC
TACCTTTTCAGGTGTGTTACCGTGTCCTGGACTGGGCGAAGTGGGCGTTC
TGGGTTCTGATGATGGTGAGTGGTCCTGGTTTCTGTTAGTAGGATTCTTA
CGTTTACCTTTCGCCATCTGGCAATCTCTGGAGTTAGTTGTTATAGTTGT
CTTTGTTAAGAGATTGTTCCTCTGTTGATTTTGTTACCCTCAATCAGCAG
GCGTGGGAGACAAGCTCTCTCCTCTGAGTTTCAGTGGTCAGAGCAGTCTC
TGCAGGCAAGTTCTCCTCTTTCGGGGAAGGTGTACAGTTATCTGGTGTTT
GGACCTCCTCCTGCCCCACTTTGAAGGCCCAAAACAGGATCTTTCCCAGA
TGCTGTGTTGCTTTGTCCAGTAAGGTGGCCGGTTGTCTGGAGTTGAAGAT
GTCGCCGTCTCAGAAGCTCTGTGGCTCTCGTCCAGGAGGAGGCCGTGCCG
TTTGGAGTCGAAGATGGCGCCCTCTCTGAAGCTCTGTGTATCTTCGCCGG
TAGGTGGCCTGGTTGTCTGGACCCGAATATGTTGCACTCTTCAGAATCTC
CTGTTATTCTTCGCCCGTATTATTAAAGGTTTGGACTTTTGTTTTTCCCC
ACGTTCTCTCTGGGTTGTCCTTGACCTTCCCCGG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGAACTCATCTGCTCATTCCAAAATTG
TTTACTTAGCATTGTTTTGAGCTATGCACTGCTGTATAGCTTGCTTGTAT
AAGAAGACTAATGAATCACAATCCTCCTCAGAAGGAATTCATAGTTCAGT
AAAAAGGATAAGTTGGAAAACAAGAGATATTTGTGAAGTAGAAGAAGGTA
AGAAACTGCAGTGTGCAGTCTGGGAAGTAACGTAACTATAATACTCTCAG
TAGCCATAAACCTGGCTCAAGCATATTTCAAAGGTCCTCGCTACAGACCA
TTTAGCAGTGTGAGGCTGCTGGCCTCAGAGATTTCCAGAAAACAAGACTT
CTCCCACACAGACGCAACCCCCCTGAACCTTAAACAAAGCTAATCCTTCT
AAGGAAAGCTCAGACTTTTCTCAGTGAAGCCGATATTTTGTAACTGCCCC
ACAACAATAAGAGGGAAAAGGATCACCAAGCTACCATATCTGACTATATC
TGTCCCATGGCCTGGGTCACCCATGTCTTTCCTTGCCACTTTGGAGAGTG
AAGGCAGGACCTAATAGGTTATTGATGAACCCTACCACTGAGCCCCACCC
TAGNCCTTACATTGTCTGGTTTATATCTTGTCTGACCAGAAAAAAAAAGG
GTGTATTTCCGCCCATGTCTAAAATCATCTTTN

Query= MSMg01no319_b02.g1 MSMg01no319_b02.g1 CHROMAT_FILE:
MSMg01no319_b02.g1 PHD_FILE: MSMg01no319_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:21 2005
         (487 letters)



>mm_chr8_69381671_69382557
          Length = 887

 Score =  723 bits (374), Expect = 0.0
 Identities = 397/410 (96%), Gaps = 11/410 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagaactcatctgctcattccaaaattgtttacttagcattgttttgagctatgcactgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cagaactcatctgctcattccaaaattgtttacttagcattgttttgagctatgcactgc 346

                                                                       
Query: 61  tgtatagcttgcttgtataagaagactaatgaatcacaatcctcctcagaaggaattcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgtatagcttgcttgtataagaagactaatgaatcacaatcctcctcagaaggaattcat 286

                                                                       
Query: 121 agttcagtaaaaaggataagttggaaaacaagagatatttgtgaagtagaagaaggtaag 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agttcagtaaaaaagataagttggaaaacaagagatatttgtgaagtagaagaaggtaag 226

                                                                       
Query: 181 aaactgcagtgtgcagtctgggaagtaacgtaactataatactctcagtagccataaacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aaactgcagtgtgcagtctgggaagtaacgtaactataatactctcagtagccataaacc 166

                                                                       
Query: 241 tggctcaagcatatttcaaaggtcctcgctacagaccatttagcagtgtgaggctgctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tggctcaagcatatttcaaaggtcctcgctacagaccatttagcagtgtgaggctgctgg 106

                                                                       
Query: 301 cctcagagatttccagaaaacaagacttctcccacacagacgcaacccccct-----gaa 355
           |||||||||||||||||||||||||||||||||||||||| |||||     |     |||
Sbjct: 105 cctcagagatttccagaaaacaagacttctcccacacagatgcaac-----ttttttgaa 51

                                                             
Query: 356 ccttaaa-caaagctaatccttctaaggaaagctcagacttttctcagtg 404
           ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  ccttaaaacaaagctaatccttctaaggaaagctcagacttttctcagtg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space:   418329
Effective search space used:   418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)