Query= MSMg01no319_e22.b1 MSMg01no319_e22.b1 CHROMAT_FILE:
MSMg01no319_e22.b1 PHD_FILE: MSMg01no319_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:37 2005
(296 letters)
>mm_chr8_48724550_48725245
Length = 696
Score = 557 bits (288), Expect = e-163
Identities = 294/296 (99%)
Strand = Plus / Plus
Query: 1 ccttgagtgtggagaggccagggtagggcagagctcagagcagcagcggtgcttgctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttgagtgtggagaggccagggtagggcagagctcagagcagcagcggtgcttgctttc 260
Query: 61 ccagccgggcgaccaccaaatcactgactgtgcactgtgttccttaagtaatatgaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagccgggcgaccaccaaatcactgactgtgcactgtgttccttaagtaatatgaattg 320
Query: 121 tcttccatcgtgacttccaataattaccttatagcctttgtactggctggctttgcgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttccatcgtgacttccaataattaccttatagcctttgtactggctggctttgcgtgt 380
Query: 181 caacttgacacgagccagagtcctcagacaggaaggagcctcccttgaggaaatgcctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caacttgacacgagccagagtcctcagacaggaaggagcctcccttgaggaaatgcctcc 440
Query: 241 atgagatacagatgtaaggcattttcttaactagcgattgatgggggagagcccag 296
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 atgagatacagctgtaaggcattttcttaactagtgattgatgggggagagcccag 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_e22.g1 MSMg01no319_e22.g1 CHROMAT_FILE:
MSMg01no319_e22.g1 PHD_FILE: MSMg01no319_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:37 2005
(237 letters)
>mm_chr8_48889369_48890006
Length = 638
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 1 caaataacacctttccactctggttgacatacatgctcatgttgcaaccttatagggtta 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 caaatagcacctttccactctggttgacatacatgctcatgttgcaaccttatagggtta 379
Query: 61 cacaactggttttatatatgaggaataaggccagctacatcccattctccaccatcagct 120
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 378 cacaactggttttatatatgaggaataaggccagctacctcccattctccgccatcagct 319
Query: 121 ctctaacccaggtgcctctgaatctctctggacatcagtaggatggtcctgatgagggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctctaacccaggtgcctctgaatctctctggacatcagtaggatggtcctgatgagggct 259
Query: 181 ggcctctgggaggtactaagagagaagctgagaagcagagac-aggagaccaatttcc 237
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 258 ggcctctgggagggactaagagagaagctgagaagcagagacaaggagaccaatttcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
